PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG018010.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

WRKY

Protein Properties

Length: 355aa MW: 39083.7 Da PI: 8.1511

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG018010.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	100.8	8.4e-32	87	143	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK+vkgs++prsYY+Ct+++Cpvkkkve+++ d+++ ei+Y+g+Hnh+ TRIDC5BG018010.1 87 DDGYNWRKYGQKVVKGSDCPRSYYKCTHPSCPVKKKVEHAE-DGQISEIIYKGKHNHQ 143 8************************************99.*************8 PP
2	WRKY	108.7	2.8e-34	243	301	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct+agC+v+k++er+++dpk+v++tYeg+Hnhe TRIDC5BG018010.1 243 LDDGYRWRKYGQKVVKGNPHPRSYYKCTFAGCNVRKHIERASSDPKAVITTYEGKHNHE 301 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MSHQQALAQV TAQASHSPLR MFDHTEQTSF SAAATSSGAL QNMSSAANVA EMSEMATTIS 60 NNEHAAFQSA EASHRYQVPA PVDKPADDGY NWRKYGQKVV KGSDCPRSYY KCTHPSCPVK 120 KKVEHAEDGQ ISEIIYKGKH NHQRPPNKRA KDGSSLAAEQ NEQSNDTASG LSGVRRDQEA 180 VYGMSEQLSG LSDGDDKDDG ESRPNEADDR ESDCKRRNIQ ISSQKALTES KIIVQTTSEV 240 DLLDDGYRWR KYGQKVVKGN PHPRSYYKCT FAGCNVRKHI ERASSDPKAV ITTYEGKHNH 300 EPPVGRGSNQ NGGNSNRSQQ KGPNSMSSNQ ASHTRTDLGN VNQGQIGVLQ FKREE

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MSHQQALAQV TAQASHSPLR MFDHTEQTSF SAAATSSGAL QNMSSAANVA EMSEMATTIS  60
NNEHAAFQSA EASHRYQVPA PVDKPADDGY NWRKYGQKVV KGSDCPRSYY KCTHPSCPVK  120
KKVEHAEDGQ ISEIIYKGKH NHQRPPNKRA KDGSSLAAEQ NEQSNDTASG LSGVRRDQEA  180
VYGMSEQLSG LSDGDDKDDG ESRPNEADDR ESDCKRRNIQ ISSQKALTES KIIVQTTSEV  240
DLLDDGYRWR KYGQKVVKGN PHPRSYYKCT FAGCNVRKHI ERASSDPKAV ITTYEGKHNH  300
EPPVGRGSNQ NGGNSNRSQQ KGPNSMSSNQ ASHTRTDLGN VNQGQIGVLQ FKREE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03340.1	1e-97	WRKY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG018010.1