PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG016050.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 677aa    MW: 79281.9 Da    PI: 8.5561
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG016050.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.18.2e-2528122191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                       +fYn+YA e GFsvrks+ +    n+ i+ r+ vCs++g+re+++ k   ++++rr+r+ tr+gC akl++++++ +++w v+++  eH+H+l
  TRIDC5BG016050.2  28 EFYNKYALEKGFSVRKSYVEWDGSNKYIILRKIVCSRQGFREDKHMKrkmEDRKRRPRSLTRVGCSAKLVITRQEeTDRWFVKDFIDEHSHPL 120
                       6******************************************999888889999*******************99****************9 PP

              FAR1  90 ap 91 
                       ap
  TRIDC5BG016050.2 121 AP 122
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 677 aa     Download sequence    
MAYASDESMF KYVNVVSKMF DSEAEGYEFY NKYALEKGFS VRKSYVEWDG SNKYIILRKI  60
VCSRQGFRED KHMKRKMEDR KRRPRSLTRV GCSAKLVITR QEETDRWFVK DFIDEHSHPL  120
APRDLSCLLR SHRRISDEQK AYIADMEKCG IRKYRIMDIL CFQYGGFDKV GCIKRDIYNF  180
CHANKQETIS AGDAKTVIMH MMARRERDVD FFFKYLVDEH GHLKGLFWAD SQSQLDYEAF  240
GDVIVFDSTY RTNKYNLPFV PFVGLNHHRS TVLFGCGIIS HDTSQAYEWM LRTFSDCMAQ  300
KHPISVITDG DLAMQRAIRV VWPDSNHRLC IWHIQQNIVR HLHDDDVKEE FRSFIYDTSS  360
IEEHEIKWIQ FLQRNKVTSE ESWLHQMYQM RKLWCAPYLE GRCFLGLSSN QRSESLNSML  420
RTHLEGKMSL FEMLEHYECC LASRRINEAL HDVEALQSVP FTEENALPLE KHAATVFTPR  480
VFKMVLWSID AVSKCQIREI LDGSEDSTYV VSKQERMDKK FGVRIEEQGG LLHRVSCSCR  540
KLECAGTPCS HIFYILGILK QTIMPDCCVP TRWTMNAKCA YAPTRKNQMY DYSLSLQRYR  600
ELRNCSHAAS FQACHSDEDY HRLKMLLQAQ HHGNNSIRFG PLMPHSQKVD KVLDPVHVPG  660
RGAPKKRLQA KTKKSRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17984DRKRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-99FAR1 family protein