PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG013850.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 708aa MW: 80746.7 Da PI: 5.6661

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG013850.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.1	7e-24	85	174	2	89
FAR1 2 fYneYAkevGFsvrkskskkskr.ngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fYneYA+++GF r+ +s++sk ++ +++r+fvCs+eg ++++ + + +++r+r++ r gC+a+++v +e +++w+v+kle+ HnH+l TRIDC5BG013850.6 85 FYNEYARHLGFPFRVGRSRRSKGaEEVVVMRRFVCSREGMYRKKNPSseEATKKRERMSMREGCNAMMEVVRE-SNHWVVSKLETAHNHNL 174 *******************651566789*****87776655446788999***********99.9************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 708 aa Download sequence
MEAARSEGDE LIADYVDCLM SLDTNARSVQ NDNLILGDPV IEAGVAASVG GITEQDAMED 60 FVPPEDPKEP LLGMTFESDE AAKTFYNEYA RHLGFPFRVG RSRRSKGAEE VVVMRRFVCS 120 REGMYRKKNP SSEEATKKRE RMSMREGCNA MMEVVRESNH WVVSKLETAH NHNLGTCSRV 180 GYLRDRGLLD ASNKITMMGS DGVPFLRQNI LGEGGDAQGL LDYLKKMQAN DPAFFHAIQV 240 DKNSCLMNVF WADARAKLAY QHFGDAVTFD TTYKKNKYTM PFVTFSGVNH HLQRVIFGCA 300 LLMEDTECSF VWLFETWLAA MSGKAPCSLV TDQNRAMKAA IGRVFPHTCH RFCKWHILSR 360 TKQKLAHTYS EHPTLIDELE SCVIESETIN TFETAWMSII DTYDLRNNTW LQAMYNIRQK 420 WVPLYLMDTF CAEISKGQKL ETMNDFYKKY FSMKVTLEVF LTQFDLSIEN HYEEEAKADM 480 DTSLNLVTTK TASPMEKQAA RTYTKAVFGR FQEEFTESLA YIIQKTKDGC ISEYNIMKDE 540 NSSDTFCVTY NSSNKMAKCS CKYFEFSGIL CRHILGVFII VDPHLLPPDY FLKRWTRKAR 600 DSGLLEYNCD NHQDDACQSI TSRYDVLCAD AIGCAEKGSG SETVYKAAKD ILQKAYEEII 660 VYERNPARVS QRDAININED VMVDDSMTDQ SLPDSRRKVC PNDIIKFS

Sequence ? help Back to Top

Protein Sequence Length: 708 aa Download sequence

MEAARSEGDE LIADYVDCLM SLDTNARSVQ NDNLILGDPV IEAGVAASVG GITEQDAMED  60
FVPPEDPKEP LLGMTFESDE AAKTFYNEYA RHLGFPFRVG RSRRSKGAEE VVVMRRFVCS  120
REGMYRKKNP SSEEATKKRE RMSMREGCNA MMEVVRESNH WVVSKLETAH NHNLGTCSRV  180
GYLRDRGLLD ASNKITMMGS DGVPFLRQNI LGEGGDAQGL LDYLKKMQAN DPAFFHAIQV  240
DKNSCLMNVF WADARAKLAY QHFGDAVTFD TTYKKNKYTM PFVTFSGVNH HLQRVIFGCA  300
LLMEDTECSF VWLFETWLAA MSGKAPCSLV TDQNRAMKAA IGRVFPHTCH RFCKWHILSR  360
TKQKLAHTYS EHPTLIDELE SCVIESETIN TFETAWMSII DTYDLRNNTW LQAMYNIRQK  420
WVPLYLMDTF CAEISKGQKL ETMNDFYKKY FSMKVTLEVF LTQFDLSIEN HYEEEAKADM  480
DTSLNLVTTK TASPMEKQAA RTYTKAVFGR FQEEFTESLA YIIQKTKDGC ISEYNIMKDE  540
NSSDTFCVTY NSSNKMAKCS CKYFEFSGIL CRHILGVFII VDPHLLPPDY FLKRWTRKAR  600
DSGLLEYNCD NHQDDACQSI TSRYDVLCAD AIGCAEKGSG SETVYKAAKD ILQKAYEEII  660
VYERNPARVS QRDAININED VMVDDSMTDQ SLPDSRRKVC PNDIIKFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-152	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG013850.6