PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG013850.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 713aa MW: 81259.3 Da PI: 5.6645 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 76.1 | 7e-24 | 85 | 174 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskr.ngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fYneYA+++GF r+ +s++sk ++ +++r+fvCs+eg ++++ + + +++r+r++ r gC+a+++v +e +++w+v+kle+ HnH+l TRIDC5BG013850.5 85 FYNEYARHLGFPFRVGRSRRSKGaEEVVVMRRFVCSREGMYRKKNPSseEATKKRERMSMREGCNAMMEVVRE-SNHWVVSKLETAHNHNL 174 *********************651566789*********87776655446788999***************99.9**************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 713 aa Download sequence |
MEAARSEGDE LIADYVDCLM SLDTNARSVQ NDNLILGDPV IEAGVAASVG GITEQDAMED 60 FVPPEDPKEP LLGMTFESDE AAKTFYNEYA RHLGFPFRVG RSRRSKGAEE VVVMRRFVCS 120 REGMYRKKNP SSEEATKKRE RMSMREGCNA MMEVVRESNH WVVSKLETAH NHNLGTCSRV 180 GYLRDRGLLD ASNKITMMGS DGVPFLRQNI LGEGGDAQGL LDYLKKMQAN DPAFFHAIQV 240 DKNSCLMNVF WADARAKLAY QHFGDAVTFD TTYKKNKYTM PFVTFSGVNH HLQRVIFGCA 300 LLMEDTECSF VWLFETWLAA MSGKAPCSLV TDQNRAMKAA IGRVFPHTCH RFCKWHILSR 360 TKQKLAHTYS EHPTLIDELE SCVIESETIN TFETAWMSII DTYDLRNNTW LQAMYNIRQK 420 WVPLYLMDTF CAEISKGQKL ETMNDFYKKY FSMKVTLEVF LTQFDLSIEN HYEEEAKADM 480 DTSLNLVTTK TASPMEKQAA RTYTKAVFGR FQEEFTESLA YIIQKTKDGC ISEYNIMKDE 540 NSSDTFCVTY NSSNKMAKCS CKYFEFSGIL CRHILGVFII VDPHLLPPDY FLKRWTRKAR 600 DSGLLEYNCD NHQDDACQSI TSRYDVLCAD AIGCAEKGSG SETVYKAAKD ILQKAYEEII 660 VYERNPARVS QRDAININED VMVDDSMTDQ SLPDSRRKVT NLLGQFLVSS WSP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-152 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG013850.5 |