PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG012210.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 377aa MW: 40414.9 Da PI: 7.944

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG012210.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.1	3.4e-32	233	288	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv a+++LGG+++AtPk+i+e+mkv+gLt+++vkSHLQkYRl+ TRIDC5BG012210.3 233 KARRCWSPELHRRFVAALQRLGGPQVATPKQIREMMKVDGLTNDEVKSHLQKYRLH 288 68****************************************************97 PP
2	Myb_DNA-binding	45.6	1.6e-14	235	286	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r W++e++ ++v a ++lGg+ t+k I ++m g+t ++ks++qky+ TRIDC5BG012210.3 235 RRCWSPELHRRFVAALQRLGGPqvaTPKQIREMMKvDGLTNDEVKSHLQKYR 286 568************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MGSSAVQKEA VVLNGGGSGA GEDHRLRALA ARTVTDSLRA AVARSSAADK AARLEECARS 60 LEAEKAKMEV FRRELPISVH LIADVIEWLK DEVAQHRRPA PDQLLAPAPS PSPAPPEKRK 120 AEVVKTEADA SDKRSWMSSA QLWTCGSHSS TSNSNGDSVK KHAQKVSNAF MPLNGLPTLA 180 KSSERPEAAV MAVPELSFSS PAIDAPCPAA PSADSSAVTD AGAQREQQSA QRKARRCWSP 240 ELHRRFVAAL QRLGGPQVAT PKQIREMMKV DGLTNDEVKS HLQKYRLHTR RASDGDQQQS 300 ASAGQWPRPE QYTTSQHSSS QSGSPQGPLQ LTVSSRGMSV TVGDSCDGGE ENEEEDGKSA 360 SYSWEMQQNG TKASLSS

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MGSSAVQKEA VVLNGGGSGA GEDHRLRALA ARTVTDSLRA AVARSSAADK AARLEECARS  60
LEAEKAKMEV FRRELPISVH LIADVIEWLK DEVAQHRRPA PDQLLAPAPS PSPAPPEKRK  120
AEVVKTEADA SDKRSWMSSA QLWTCGSHSS TSNSNGDSVK KHAQKVSNAF MPLNGLPTLA  180
KSSERPEAAV MAVPELSFSS PAIDAPCPAA PSADSSAVTD AGAQREQQSA QRKARRCWSP  240
ELHRRFVAAL QRLGGPQVAT PKQIREMMKV DGLTNDEVKS HLQKYRLHTR RASDGDQQQS  300
ASAGQWPRPE QYTTSQHSSS QSGSPQGPLQ LTVSSRGMSV TVGDSCDGGE ENEEEDGKSA  360
SYSWEMQQNG TKASLSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G03500.1	5e-40	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG012210.3