PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012020.18
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 343aa    MW: 38780.5 Da    PI: 8.0614
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012020.18genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B337.35e-12471291194
                        HHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                 B3  11 lksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                        + sg lv+ k++a+++     e++ +tl + ++++ W  +l+++  + + +l++GW++F+  n+L+e D++vF+++++  e ++vv
  TRIDC5BG012020.18  47 SMSGPLVICKDYAAKYLPH--EDQFITLCHpRKSNIWLDNLKVTTDG-SGMLSAGWSSFALHNELRESDVCVFEVSKSaGEMTMVV 129
                        445679**********423..344677777477799*9999654444.458***********************887544444444 PP
2B351.81.5e-162153021199
                        HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
                 B3  11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                         k+++l++p kfa++h ++++++  l l+  ++++W  ++ y  k +++   + W +Fv++n+L+ g ++vF+l++  s++++ v+vf k
  TRIDC5BG012020.18 215 IKNNLLTFPGKFAAKH-LVERSHDILLLRPNRSETWCARYYYHPKEQGFS-YSSWTKFVRDNKLCKGHVCVFELMKGvSKATMIVHVFTK 302
                        6899***********9.4555555566666889*******9999998875.569*********************888*********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
PPETTEPCFV LAMGCNLTTA QKAQIDALVK KVRPVIPFYI TAMNKTSMSG PLVICKDYAA  60
KYLPHEDQFI TLCHPRKSNI WLDNLKVTTD GSGMLSAGWS SFALHNELRE SDVCVFEVSK  120
SAGEMTMVVH SLEGGHHLQG KEPESQNKCD YPVKGKAIKE AESDHKHAES KSNYYYSKYA  180
KGLTGEELEE IFRSALIQQG NVVYVTILGK NQVRIKNNLL TFPGKFAAKH LVERSHDILL  240
LRPNRSETWC ARYYYHPKEQ GFSYSSWTKF VRDNKLCKGH VCVFELMKGV SKATMIVHVF  300
TKVDGRTERE EYFSACCTYS TEIFFNVSSV ELTEILLNLS GFP