PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG012000.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 313aa    MW: 35991.1 Da    PI: 6.5574
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG012000.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.12e-10521311494
                       T-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
                B3  14 grlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                       g l + k++a+++    +e++ +tl +++  + W  +l    ++g+++l+ GW+ Fv  n+L+e D+++F+++++  e ++vv
  TRIDC5BG012000.5  52 GSLAICKDYAAKYLP--HEDQFITLCHPHKsNIWVDNL-KVITDGSCMLSVGWSCFVLHNELRESDICLFEVSKSdGEVTMVV 131
                       66999999*999942..344568888977636676666.56777789************************887534444444 PP
2B3521.2e-162143041099
                       HHHTT-EE--HHH.HTT---..--SEEEEEE.TTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE CS
                B3  10 vlksgrlvlpkkfaeehggkkeesktltled.esgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvf 97 
                       ++++++l++p++ a++h  +  +s ++ l    + ++W v++ y  +s +    +  + W +Fv++ngL eg ++vF+l++   e++++v+vf
  TRIDC5BG012000.5 214 SSRNNLLTFPRDLAAKHLAE--RSHDILLLRpNRREKWCVRYYY--HSMMriqGFSYSSWTKFVSDNGLHEGHVCVFELMKGvCEATMMVHVF 302
                       3455889**********433..34455555527779******44..333323445668**********************888********** PP

                       -S CS
                B3  98 rk 99 
                       rk
  TRIDC5BG012000.5 303 RK 304
                       96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MWPSEIAEPH YVLATGCNLT TAQKAEVDAL VKKVRPVIPF YITAMNKTSM PGSLAICKDY  60
AAKYLPHEDQ FITLCHPHKS NIWVDNLKVI TDGSCMLSVG WSCFVLHNEL RESDICLFEV  120
SKSDGEVTMV VHSLEGGHHL QGKKPESQNK CTYPVKVEVT EEEDSDKEYA ESNYYYSRYA  180
YDLTGEEQEE IFRSALIQQG NPVYVAVLQE NHVSSRNNLL TFPRDLAAKH LAERSHDILL  240
LRPNRREKWC VRYYYHSMMR IQGFSYSSWT KFVSDNGLHE GHVCVFELMK GVCEATMMVH  300
VFRKFNGRFV LLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-07B3 family protein