PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG011790.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 735aa    MW: 85627.7 Da    PI: 6.0746
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG011790.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.27.5e-20126208191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn+YA  +GF+ ++ +++ +      +k ++ C+++gk++ + +  +++r++++ ++t+C+ak+ vk++ +g+we t++++eHnH+l+p
  TRIDC5BG011790.7 126 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLT-KGQWEFTTVRNEHNHPLCP 208
                       5*****************9998......4678**********99988.99999******************.9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    
LCVEPVGKQS MTEGTLQPAG DNDQDPSSDS VEKNTEGLLA DGQDQQTNSV YHPLQQAEEE  60
NQLHDNVESN EMLRNNSSSE TDSDSSSGSD SDSEVGKYFY PQIEQLEMAK QPEPGMKFQT  120
LEDAHRFYNT YALLTGFEAK RGTNYMRKKF HLICNRSGKS RATPDLQRKR KRKSIEKTNC  180
QAKVIVKLTK GQWEFTTVRN EHNHPLCPSA SLTKFYLSHK HISTEERSFL KVLQRTRIPP  240
NKVMKIFRRM RGSFGSIPFK KKDGTNLLCA EQHRKENSDV GRMLMYFKEK ELQDPSFQCM  300
KQTDEDNIVR SVFWTDARSR MDYEIFGDFL LFDTTYTTDR HNMLFAPIIG LNNHGRTLLL  360
GCALLHDEST ETYKWMFETL LHVMEDKMPV SIITNQDEAM AKAIGEVMPQ VRHWLCKWDV  420
LEKAQQNISA FIAESGNIKA DLDSLVDNSL TEKEFEEGWD ALIERYGASE NEYLQILWQR  480
RKNWVPVYFR EDFYPFVQSH GCDKGMNLLF NDYVLSIDRI EKFIERYEEI YKNITKTDEE  540
DRLQTGTVPS CFSLQPIEKH AADIYTRQIF LKVQRELLHS TAFNVQEVQR GAVYRLNKVF  600
NYENPEFDRN NFEVQVESGT NAFKCQCAKF TRDGVLCCHI FRLFTQFGIN QIPEQYIVPR  660
WTEKFREEKE KQYKEKCSEQ MDTTMRYTNF MTKMADLGKT ICSDGAKYDA FMLEVDKIQE  720
NFATWVTAGL LLCKS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168173RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.16e-80FAR1 family protein