PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG011790.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 738aa    MW: 86028.9 Da    PI: 5.9816
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG011790.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.27.6e-20137219191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn+YA  +GF+ ++ +++ +      +k ++ C+++gk++ + +  +++r++++ ++t+C+ak+ vk++ +g+we t++++eHnH+l+p
  TRIDC5BG011790.6 137 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLT-KGQWEFTTVRNEHNHPLCP 219
                       5*****************9998......4678**********99988.99999******************.9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 738 aa     Download sequence    
MTEGRLQPAG DNYQEPVGKQ SMTEGTLQPA GDNDQDPSSD SVEKNTEGLL ADGQDQQTNS  60
VYHPLQQAEE ENQLHDNVES NEMLRNNSSS ETDSDSSSGS DSDSEVGKYF YPQIEQLEMA  120
KQPEPGMKFQ TLEDAHRFYN TYALLTGFEA KRGTNYMRKK FHLICNRSGK SRATPDLQRK  180
RKRKSIEKTN CQAKVIVKLT KGQWEFTTVR NEHNHPLCPS ASLTKFYLSH KHISTEERSF  240
LKVLQRTRIP PNKVMKIFRR MRGSFGSIPF KKKDGTNLLC AEQHRKENSD VGRMLMYFKE  300
KELQDPSFQC MKQTDEDNIV RSVFWTDARS RMDYEIFGDF LLFDTTYTTD RHNMLFAPII  360
GLNNHGRTLL LGCALLHDES TETYKWMFET LLHVMEDKMP VSIITNQDEA MAKAIGEVMP  420
QVRHWLCKWD VLEKAQQNIS AFIAESGNIK ADLDSLVDNS LTEKEFEEGW DALIERYGAS  480
ENEYLQILWQ RRKNWVPVYF REDFYPFVQS HGCDKGMNLL FNDYVLSIDR IEKFIERYEE  540
IYKNITKTDE EDRLQTGTVP SCFSLQPIEK HAADIYTRQI FLKVQRELLH STAFNVQEVQ  600
RGAVYRLNKV FNYENPEFDR NNFEVQVESG TNAFKCQCAK FTRDGVLCCH IFRLFTQFGI  660
NQIPEQYIVP RWTEKFREEK EKQYKEKCSE QMDTTMRYTN FMTKMADLGK TICSDGAKYD  720
AFMLEVDKIQ ENFATAQK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179184RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-80FAR1 family protein