PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG011790.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 717aa    MW: 83741.4 Da    PI: 6.0744
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG011790.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.27.3e-20116198191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn+YA  +GF+ ++ +++ +      +k ++ C+++gk++ + +  +++r++++ ++t+C+ak+ vk++ +g+we t++++eHnH+l+p
  TRIDC5BG011790.5 116 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLT-KGQWEFTTVRNEHNHPLCP 198
                       5*****************9998......4678**********99988.99999******************.9****************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    
MTEGTLQPAG DNDQDPSSDS VEKNTEGLLA DGQDQQTNSV YHPLQQAEEE NQLHDNVESN  60
EMLRNNSSSE TDSDSSSGSD SDSEVGKYFY PQIEQLEMAK QPEPGMKFQT LEDAHRFYNT  120
YALLTGFEAK RGTNYMRKKF HLICNRSGKS RATPDLQRKR KRKSIEKTNC QAKVIVKLTK  180
GQWEFTTVRN EHNHPLCPSA SLTKFYLSHK HISTEERSFL KVLQRTRIPP NKVMKIFRRM  240
RGSFGSIPFK KKDGTNLLCA EQHRKENSDV GRMLMYFKEK ELQDPSFQCM KQTDEDNIVR  300
SVFWTDARSR MDYEIFGDFL LFDTTYTTDR HNMLFAPIIG LNNHGRTLLL GCALLHDEST  360
ETYKWMFETL LHVMEDKMPV SIITNQDEAM AKAIGEVMPQ VRHWLCKWDV LEKAQQNISA  420
FIAESGNIKA DLDSLVDNSL TEKEFEEGWD ALIERYGASE NEYLQILWQR RKNWVPVYFR  480
EDFYPFVQSH GCDKGMNLLF NDYVLSIDRI EKFIERYEEI YKNITKTDEE DRLQTGTVPS  540
CFSLQPIEKH AADIYTRQIF LKVQRELLHS TAFNVQEVQR GAVYRLNKVF NYENPEFDRN  600
NFEVQVESGT NAFKCQCAKF TRDGVLCCHI FRLFTQFGIN QIPEQYIVPR WTEKFREEKE  660
KQYKEKCSEQ MDTTMRYTNF MTKMADLGKT ICSDGAKYDA FMLEVDKIQE NFATAQK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1158163RKRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-80FAR1 family protein