PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG011790.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 809aa MW: 93691.5 Da PI: 5.3806

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG011790.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63	8.6e-20	208	290	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA +GF+ ++ +++ + +k ++ C+++gk++ + + +++r++++ ++t+C+ak+ vk++ +g+we t++++eHnH+l+p TRIDC5BG011790.2 208 RFYNTYALLTGFEAKRGTNYMR------KKFHLICNRSGKSRATPDL-QRKRKRKSIEKTNCQAKVIVKLT-KGQWEFTTVRNEHNHPLCP 290 5***************9998......4678******99988.99999**************.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
MPPSPGADTQ KFVMGDMVTE LDEAGVRNAE NSTEQREAYN VVDDEGSPVP LLMLPSGKIK 60 YLTQEPVGNQ SMTEGRLQPA GDNYQEPVGK QSMTEGTLQP AGDNDQDPSS DSVEKNTEGL 120 LADGQDQQTN SVYHPLQQAE EENQLHDNVE SNEMLRNNSS SETDSDSSSG SDSDSEVGKY 180 FYPQIEQLEM AKQPEPGMKF QTLEDAHRFY NTYALLTGFE AKRGTNYMRK KFHLICNRSG 240 KSRATPDLQR KRKRKSIEKT NCQAKVIVKL TKGQWEFTTV RNEHNHPLCP SASLTKFYLS 300 HKHISTEERS FLKVLQRTRI PPNKVMKIFR RMRGSFGSIP FKKKDGTNLL CAEQHRKENS 360 DVGRMLMYFK EKELQDPSFQ CMKQTDEDNI VRSVFWTDAR SRMDYEIFGD FLLFDTTYTT 420 DRHNMLFAPI IGLNNHGRTL LLGCALLHDE STETYKWMFE TLLHVMEDKM PVSIITNQDE 480 AMAKAIGEVM PQVRHWLCKW DVLEKAQQNI SAFIAESGNI KADLDSLVDN SLTEKEFEEG 540 WDALIERYGA SENEYLQILW QRRKNWVPVY FREDFYPFVQ SHGCDKGMNL LFNDYVLSID 600 RIEKFIERYE EIYKNITKTD EEDRLQTGTV PSCFSLQPIE KHAADIYTRQ IFLKVQRELL 660 HSTAFNVQEV QRGAVYRLNK VFNYENPEFD RNNFEVQVES GTNAFKCQCA KFTRDGVLCC 720 HIFRLFTQFG INQIPEQYIV PRWTEKFREE KEKQYKEKCS EQMDTTMRYT NFMTKMADLG 780 KTICSDGAKY DAFMLEVDKI QENFATAQK

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

MPPSPGADTQ KFVMGDMVTE LDEAGVRNAE NSTEQREAYN VVDDEGSPVP LLMLPSGKIK  60
YLTQEPVGNQ SMTEGRLQPA GDNYQEPVGK QSMTEGTLQP AGDNDQDPSS DSVEKNTEGL  120
LADGQDQQTN SVYHPLQQAE EENQLHDNVE SNEMLRNNSS SETDSDSSSG SDSDSEVGKY  180
FYPQIEQLEM AKQPEPGMKF QTLEDAHRFY NTYALLTGFE AKRGTNYMRK KFHLICNRSG  240
KSRATPDLQR KRKRKSIEKT NCQAKVIVKL TKGQWEFTTV RNEHNHPLCP SASLTKFYLS  300
HKHISTEERS FLKVLQRTRI PPNKVMKIFR RMRGSFGSIP FKKKDGTNLL CAEQHRKENS  360
DVGRMLMYFK EKELQDPSFQ CMKQTDEDNI VRSVFWTDAR SRMDYEIFGD FLLFDTTYTT  420
DRHNMLFAPI IGLNNHGRTL LLGCALLHDE STETYKWMFE TLLHVMEDKM PVSIITNQDE  480
AMAKAIGEVM PQVRHWLCKW DVLEKAQQNI SAFIAESGNI KADLDSLVDN SLTEKEFEEG  540
WDALIERYGA SENEYLQILW QRRKNWVPVY FREDFYPFVQ SHGCDKGMNL LFNDYVLSID  600
RIEKFIERYE EIYKNITKTD EEDRLQTGTV PSCFSLQPIE KHAADIYTRQ IFLKVQRELL  660
HSTAFNVQEV QRGAVYRLNK VFNYENPEFD RNNFEVQVES GTNAFKCQCA KFTRDGVLCC  720
HIFRLFTQFG INQIPEQYIV PRWTEKFREE KEKQYKEKCS EQMDTTMRYT NFMTKMADLG  780
KTICSDGAKY DAFMLEVDKI QENFATAQK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	250	255	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-79	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG011790.2