PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG010780.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 213aa MW: 23435.8 Da PI: 10.6085 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.1 | 2.4e-30 | 147 | 204 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C++ gCp++k+ver+ ++p ++++tYegeH h+ TRIDC5BG010780.7 147 DEYSWRKYGQKPIKGSPHPRGYYKCSTVrGCPARKHVERCVDEPVMLIVTYEGEHSHN 204 9************************9888****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MVQPLSVQFQ FGATAHRYPF QQQQQNLQAQ MFKRSNSGIS LKFDSPSGGA GTISSPRSFM 60 SSLSMDGSVA SLDGKPPMRL LGGPAASDPL NVRQCAPKRR CTGRGEDGSG KCTTGGKCHC 120 SKRRKLRIKR SIKVPAISNK ISDIPPDEYS WRKYGQKPIK GSPHPRGYYK CSTVRGCPAR 180 KHVERCVDEP VMLIVTYEGE HSHNRLPTQS AQT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30590.1 | 1e-59 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG010780.7 |