PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG010780.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 355aa MW: 38126.4 Da PI: 10.8004 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.9 | 5.8e-30 | 289 | 346 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C++ gCp++k+ver+ ++p ++++tYegeH h+ TRIDC5BG010780.3 289 DEYSWRKYGQKPIKGSPHPRGYYKCSTVrGCPARKHVERCVDEPVMLIVTYEGEHSHN 346 9************************9888****************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 355 aa Download sequence |
MEEVEAANSA AVESCHKLLA LLSQQQDPAL LRSIASETGE ACAKFRKVVS LLSNGGGGRG 60 GHARGRFSRR RKPVGFLSQK GFLESSSNTP LGMLMSGSAP TPSPSAASAA QLRPQVGAPP 120 QPRSLDLVSS SSKSAHQFGP PKMVQPLSVQ FQFGATAHRY PFQQQQQNLQ AQMFKRSNSG 180 ISLKFDSPSG GAGTISSPRS FMSSLSMDGS VASLDGKPPM RLLGGPAASD PLNVRQCAPK 240 RRCTGRGEDG SGKCTTGGKC HCSKRRKLRI KRSIKVPAIS NKISDIPPDE YSWRKYGQKP 300 IKGSPHPRGY YKCSTVRGCP ARKHVERCVD EPVMLIVTYE GEHSHNRLPT QSAQT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G28650.1 | 1e-61 | WRKY family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG010780.3 |