PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG010270.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | CPP | ||||||||
Protein Properties | Length: 237aa MW: 25400.7 Da PI: 8.2854 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 51.5 | 1.9e-16 | 160 | 199 | 2 | 41 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+CkkskClk+YCeCf+ag++Cse C+C++C Nk + TRIDC5BG010270.4 160 SCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPS 199 689**********************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
NDQICNAVEE PSDHIPIDQS ALSQNMRGMR RRCLFNEKAG AVNKAAKKTS DRHSANTTTP 60 RCKTNSGDKP VRTPPCALPG IGLHLNALAP ISTDKIVPQA AQSTINQASN FPCAVSSSTA 120 EPNIVNEDSS QAIVVANADE SGQGSPKKKR HKFDDGDGTS CKRCSCKKSK CLKLYCECFH 180 AGVFCSEPCS CQGCLNKPSN MEIVLSTREQ IESRNPLAFA PKVIRTSEPG QELGGIP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14770.1 | 2e-34 | CPP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG010270.4 |