PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG010230.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 416aa MW: 46370 Da PI: 7.6135

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG010230.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	45.1	1.9e-14	96	133	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +++C+Ckks+Clk+YC Cfa+g++Cse C C+ C Nk TRIDC5BG010230.6 96 CRTCSCKKSRCLKLYCVCFASGSQCSELCGCDPCYNKP 133 789*********************************96 PP
2	TCR	45.1	2e-14	172	207	4	39
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++C+Ckks ClkkYC+C++ g+ Cs +CkC+dCkN TRIDC5BG010230.6 172 RKCTCKKSGCLKKYCDCYQGGAGCSINCKCDDCKNP 207 79*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXPAPA APATEAMALV 60 SAPAPAAVWT AVSPPAEANG SSDRKKKRKA EDGEGCRTCS CKKSRCLKLY CVCFASGSQC 120 SELCGCDPCY NKPIHGVQQN TPPGLPLQVV RPAEAGQNST EFARYQMDFF RRKCTCKKSG 180 CLKKYCDCYQ GGAGCSINCK CDDCKNPYGK KVGVILDGKS ILATPTPGPT PIERNGTEVI 240 SSDDDDDDED DYYMNRPLSP IPPSPVSRES SFQQETLVGV EVHTVNGHLY PKPLTQVRPE 300 TWQLSRRPAE EARGEQWRYM RRPSEDGTSD AMEGHADPKF HHQRDNNNSK QRESPADNRF 360 SIPRCIEVMN GMADLSPVDK SLAPDVFLDP SNREIFLSLS VDIRTMWLKR KMRSLV

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXPAPA APATEAMALV  60
SAPAPAAVWT AVSPPAEANG SSDRKKKRKA EDGEGCRTCS CKKSRCLKLY CVCFASGSQC  120
SELCGCDPCY NKPIHGVQQN TPPGLPLQVV RPAEAGQNST EFARYQMDFF RRKCTCKKSG  180
CLKKYCDCYQ GGAGCSINCK CDDCKNPYGK KVGVILDGKS ILATPTPGPT PIERNGTEVI  240
SSDDDDDDED DYYMNRPLSP IPPSPVSRES SFQQETLVGV EVHTVNGHLY PKPLTQVRPE  300
TWQLSRRPAE EARGEQWRYM RRPSEDGTSD AMEGHADPKF HHQRDNNNSK QRESPADNRF  360
SIPRCIEVMN GMADLSPVDK SLAPDVFLDP SNREIFLSLS VDIRTMWLKR KMRSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	5e-38	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG010230.6