PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG007960.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 809aa MW: 92805.5 Da PI: 5.0031

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG007960.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.7	1.1e-24	102	189	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 Y+eY++++GFsvrk k+++ + ++ i +++++Cskeg +++e+ + +++ +++etrt+Cka+++ + +++g+w+v+++ eHnHel+p TRIDC5BG007960.3 102 LYCEYGHRMGFSVRKGKQYYFTGTKVIRTKDYYCSKEGLKDDEQLT--EANFNKPETRTNCKAMVRFRVDSEGQWRVIQIIPEHNHELVP 189 7***************************************9988..9999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 809 aa Download sequence
LPLIVEKMEG TSVPIEIDGD AICLENVGDD EHEAQESGQV QIIYATENGA QVAFDSQEQG 60 TEEHSVRSEE DQENNSVIPS REEFTEELRT KVAYSEEQAY RLYCEYGHRM GFSVRKGKQY 120 YFTGTKVIRT KDYYCSKEGL KDDEQLTEAN FNKPETRTNC KAMVRFRVDS EGQWRVIQII 180 PEHNHELVPP EEIHLLRSVR ILSIPKPGTL NAMVNAEIQS MHDSLHVHDD GAECHSQVSI 240 QSYALLEPED AEALVGYLKR RTIEQGMFYW DVQVDQEGQM TNFFWRDGRS RVDYDCFGDV 300 VVFDTSYRTN KYNMICAPFV GINHHMQNVM FGCAFMLDES LTSYEWLLKS FLESMGGCPP 360 KTIFTDQNDT ISKAIEVILP ETRHCLCQWH IEKNLQAHLD TPNASGTFHS MFMKCMKDCE 420 SEAEFEETWA MMLQEHNLQD DQWLTDLFEQ RHKWCTALHK VAFDCGIRSL DRNFSSHNVL 480 GSIADESTSP TNFALEFDKL VGSWRTNESV DDIQCKQISP ECSVKQNSIL QHAAEVYTHK 540 VYKSLETEFL DGCTGTSYQE MQCSETLYRF EFIMQSSPKV WIVFLDTSTM ELSCSCKKFE 600 MMGILCSHAL NALGLKNLDK IPESYVLKRW TKYVRKGTYV FPSDQSPEQD CTEAVLAYRN 660 RAMWFVYDLL MKSKGHQDTR KLILDVLENG EKSLESVCEL KRMHIHPSGK DKDASKAEKR 720 KKKLSKQDKN SRNVKQVVLP PPAESVFVDQ PNQNQYFATE DIATNSSIGR PFFYQEYPAT 780 GVSASQIEGH AKYPFRASVC TSTTGMLTD

Sequence ? help Back to Top

Protein Sequence Length: 809 aa Download sequence

LPLIVEKMEG TSVPIEIDGD AICLENVGDD EHEAQESGQV QIIYATENGA QVAFDSQEQG  60
TEEHSVRSEE DQENNSVIPS REEFTEELRT KVAYSEEQAY RLYCEYGHRM GFSVRKGKQY  120
YFTGTKVIRT KDYYCSKEGL KDDEQLTEAN FNKPETRTNC KAMVRFRVDS EGQWRVIQII  180
PEHNHELVPP EEIHLLRSVR ILSIPKPGTL NAMVNAEIQS MHDSLHVHDD GAECHSQVSI  240
QSYALLEPED AEALVGYLKR RTIEQGMFYW DVQVDQEGQM TNFFWRDGRS RVDYDCFGDV  300
VVFDTSYRTN KYNMICAPFV GINHHMQNVM FGCAFMLDES LTSYEWLLKS FLESMGGCPP  360
KTIFTDQNDT ISKAIEVILP ETRHCLCQWH IEKNLQAHLD TPNASGTFHS MFMKCMKDCE  420
SEAEFEETWA MMLQEHNLQD DQWLTDLFEQ RHKWCTALHK VAFDCGIRSL DRNFSSHNVL  480
GSIADESTSP TNFALEFDKL VGSWRTNESV DDIQCKQISP ECSVKQNSIL QHAAEVYTHK  540
VYKSLETEFL DGCTGTSYQE MQCSETLYRF EFIMQSSPKV WIVFLDTSTM ELSCSCKKFE  600
MMGILCSHAL NALGLKNLDK IPESYVLKRW TKYVRKGTYV FPSDQSPEQD CTEAVLAYRN  660
RAMWFVYDLL MKSKGHQDTR KLILDVLENG EKSLESVCEL KRMHIHPSGK DKDASKAEKR  720
KKKLSKQDKN SRNVKQVVLP PPAESVFVDQ PNQNQYFATE DIATNSSIGR PFFYQEYPAT  780
GVSASQIEGH AKYPFRASVC TSTTGMLTD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-82	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG007960.3