PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG007760.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 414aa MW: 45415 Da PI: 9.4161 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.9 | 8.6e-19 | 80 | 137 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++t+eq+e+Le++++++++ps +r+++ + + +++ +q+kvWFqNrR +ek+ TRIDC5BG007760.5 80 YVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCpilcNIEPKQIKVWFQNRRCREKQ 137 6789****************************************************97 PP | |||||||
2 | START | 137.1 | 1.9e-43 | 230 | 404 | 4 | 173 |
HHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 4 eeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 ee+++++++ka+ ++ Wv++ +++g++++ +++ s+++ g a+ra+g+v +++ v+e+l+d++ W ++++ +++l v +g g+++l+ TRIDC5BG007760.5 230 EETLTAFLSKATGTAVEWVQMMGMKPGPDSIGIIAVSHNCIGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDILHVFPTGngGTIELI 321 68899***************************************************.8888888888************************** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlk 173 +++++a+++l++ Rdf+++Ry+ l +g++vi+++S+++ + p+ +++++Rae+lpSg+li+p+++g+s +++v+hvdl+ TRIDC5BG007760.5 322 YMQTYAPTTLAApRDFWTLRYTCGLDDGSLVICERSLTQSTGGPSgpnTPGFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLD 404 **********999****************************9999999*********************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence |
PKKPESERHG DPPQRSTPRS LLSLSQAMTR HRPWPPSHPP PPPHPLRVTA AAAATGTDAG 60 KKMARLSPGA AAPQVDTGKY VRYTPEQVEA LERVYNECPK PSSLRRQQII RDCPILCNIE 120 PKQIKVWFQN RRCREKQRKE SSRMQTVNRK LTAMNKLLME ENDRLQKQVS RLVYENASVK 180 SLKTKIHKAS AATTDTSCES VVTSGQQQAL AAPRPQRDAN NPAGLLAIGE ETLTAFLSKA 240 TGTAVEWVQM MGMKPGPDSI GIIAVSHNCI GVAARACGLV SLEPTKVAEI LKDRPSWYRD 300 CRCVDILHVF PTGNGGTIEL IYMQTYAPTT LAAPRDFWTL RYTCGLDDGS LVICERSLTQ 360 STGGPSGPNT PGFIRAEVLP SGYLIRPCEG GGSMIHIVDH VDLDVSNKNG FHIT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30490.1 | 1e-177 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG007760.5 |