PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG007760.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 912aa MW: 98900.9 Da PI: 7.2697 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.4 | 2.5e-18 | 83 | 140 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++t+eq+e+Le++++++++ps +r+++ + + +++ +q+kvWFqNrR +ek+ TRIDC5BG007760.2 83 YVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCpilcNIEPKQIKVWFQNRRCREKQ 140 6789****************************************************97 PP | |||||||
2 | START | 160.8 | 1e-50 | 233 | 438 | 4 | 204 |
HHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS START 4 eeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 ee+++++++ka+ ++ Wv++ +++g++++ +++ s+++ g a+ra+g+v +++ v+e+l+d++ W ++++ +++l v +g g+++l+ TRIDC5BG007760.2 233 EETLTAFLSKATGTAVEWVQMMGMKPGPDSIGIIAVSHNCIGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDILHVFPTGngGTIELI 324 68899***************************************************.8888888888************************** PP EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHH CS START 95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrs 183 +++++a+++l++ Rdf+++Ry+ l +g++vi+++S+++ + p+ +++++Rae+lpSg+li+p+++g+s +++v+hvdl++++++++lr+ TRIDC5BG007760.2 325 YMQTYAPTTLAApRDFWTLRYTCGLDDGSLVICERSLTQSTGGPSgpnTPGFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRP 417 **********999****************************9999999********************************************* PP HHHHHHHHHHHHHHHHTXXXX CS START 184 lvksglaegaktwvatlqrqc 204 l++s + ++k++ a+l++ + TRIDC5BG007760.2 418 LYESPKIVAQKMTIAALRHIR 438 ****************99865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 912 aa Download sequence |
QPPPKKPESE RHGDPPQRST PRSLLSLSQA MTRHRPWPPS HPPPPPHPLR VTAAAAATGT 60 DAGKKMARLS PGAAAPQVDT GKYVRYTPEQ VEALERVYNE CPKPSSLRRQ QIIRDCPILC 120 NIEPKQIKVW FQNRRCREKQ RKESSRMQTV NRKLTAMNKL LMEENDRLQK QVSRLVYENA 180 SVKSLKTKIH KASAATTDTS CESVVTSGQQ QALAAPRPQR DANNPAGLLA IGEETLTAFL 240 SKATGTAVEW VQMMGMKPGP DSIGIIAVSH NCIGVAARAC GLVSLEPTKV AEILKDRPSW 300 YRDCRCVDIL HVFPTGNGGT IELIYMQTYA PTTLAAPRDF WTLRYTCGLD DGSLVICERS 360 LTQSTGGPSG PNTPGFIRAE VLPSGYLIRP CEGGGSMIHI VDHVDLDAWS VPEVLRPLYE 420 SPKIVAQKMT IAALRHIRQI AHESSGEIPY GAGRQPAVLR TFSQRLSRGF NDAVSGFPDD 480 GWSLLTSDGA EDITITVNSS PNKLVGSHVS PSPLFSAIGG GILCAKASML VQDVPPALLV 540 RFLREHRSEW ADPGVDAYSA ASLRASPYAV PGLRAGGFMG NQVILPLAHT LEHEEFLEVL 600 RLEGHGFSHD EVLLARDMYL LQLCSGVDEN ASGACAQLVF APIDESFADD APLLPSGFRV 660 IPLDTKTDVP SATRTLDLAS ALEVGSGGAL RGSGDSPGGC STRSVLTIAF QFSFENHLRE 720 SVAAMARQYV RAVMASVQRV AMAIAPSRLG GSQIQLKHPP GSPEALTLAS WIGRSYRAHT 780 GEEIRWSDTE EADSPLKLLW NHSDAILCCS LKPAPMFTFG NNAALDMLET TLVNLQDISL 840 EAILDDEGRK ALCAEFSKVM QQGFAYLPGG VCKSSMGRQV SYEQAVAWKV VGDDVAGAPH 900 CLAFMFVNWT FL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34710.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG007760.2 |