PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG007760.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 912aa    MW: 98900.9 Da    PI: 7.2697
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG007760.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.42.5e-1883140457
                       -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                         ++t+eq+e+Le++++++++ps  +r+++ + +    +++ +q+kvWFqNrR +ek+
  TRIDC5BG007760.2  83 YVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCpilcNIEPKQIKVWFQNRRCREKQ 140
                       6789****************************************************97 PP

2START160.81e-502334384204
                       HHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
             START   4 eeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                       ee+++++++ka+ ++  Wv++  +++g++++ +++ s+++ g a+ra+g+v  +++  v+e+l+d++ W ++++ +++l v  +g  g+++l+
  TRIDC5BG007760.2 233 EETLTAFLSKATGTAVEWVQMMGMKPGPDSIGIIAVSHNCIGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDILHVFPTGngGTIELI 324
                       68899***************************************************.8888888888************************** PP

                       EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHH CS
             START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrs 183
                       +++++a+++l++ Rdf+++Ry+  l +g++vi+++S+++ +  p+   +++++Rae+lpSg+li+p+++g+s +++v+hvdl++++++++lr+
  TRIDC5BG007760.2 325 YMQTYAPTTLAApRDFWTLRYTCGLDDGSLVICERSLTQSTGGPSgpnTPGFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRP 417
                       **********999****************************9999999********************************************* PP

                       HHHHHHHHHHHHHHHHTXXXX CS
             START 184 lvksglaegaktwvatlqrqc 204
                       l++s  + ++k++ a+l++ +
  TRIDC5BG007760.2 418 LYESPKIVAQKMTIAALRHIR 438
                       ****************99865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 912 aa     Download sequence    
QPPPKKPESE RHGDPPQRST PRSLLSLSQA MTRHRPWPPS HPPPPPHPLR VTAAAAATGT  60
DAGKKMARLS PGAAAPQVDT GKYVRYTPEQ VEALERVYNE CPKPSSLRRQ QIIRDCPILC  120
NIEPKQIKVW FQNRRCREKQ RKESSRMQTV NRKLTAMNKL LMEENDRLQK QVSRLVYENA  180
SVKSLKTKIH KASAATTDTS CESVVTSGQQ QALAAPRPQR DANNPAGLLA IGEETLTAFL  240
SKATGTAVEW VQMMGMKPGP DSIGIIAVSH NCIGVAARAC GLVSLEPTKV AEILKDRPSW  300
YRDCRCVDIL HVFPTGNGGT IELIYMQTYA PTTLAAPRDF WTLRYTCGLD DGSLVICERS  360
LTQSTGGPSG PNTPGFIRAE VLPSGYLIRP CEGGGSMIHI VDHVDLDAWS VPEVLRPLYE  420
SPKIVAQKMT IAALRHIRQI AHESSGEIPY GAGRQPAVLR TFSQRLSRGF NDAVSGFPDD  480
GWSLLTSDGA EDITITVNSS PNKLVGSHVS PSPLFSAIGG GILCAKASML VQDVPPALLV  540
RFLREHRSEW ADPGVDAYSA ASLRASPYAV PGLRAGGFMG NQVILPLAHT LEHEEFLEVL  600
RLEGHGFSHD EVLLARDMYL LQLCSGVDEN ASGACAQLVF APIDESFADD APLLPSGFRV  660
IPLDTKTDVP SATRTLDLAS ALEVGSGGAL RGSGDSPGGC STRSVLTIAF QFSFENHLRE  720
SVAAMARQYV RAVMASVQRV AMAIAPSRLG GSQIQLKHPP GSPEALTLAS WIGRSYRAHT  780
GEEIRWSDTE EADSPLKLLW NHSDAILCCS LKPAPMFTFG NNAALDMLET TLVNLQDISL  840
EAILDDEGRK ALCAEFSKVM QQGFAYLPGG VCKSSMGRQV SYEQAVAWKV VGDDVAGAPH  900
CLAFMFVNWT FL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein