PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG006630.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 807aa    MW: 89143.6 Da    PI: 6.2319
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG006630.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.72.2e-2347147198
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+lt sd++++g +++p++ ae+       +++++++ +l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++
  TRIDC5BG006630.5  47 FCKTLTASDTSTHGGFSVPRRSAEKVfppldfSLQPPCQ-ELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFI--WN 136
                       99******************************9999996.9************************************************..67 PP

                       SEE..EEEEE- CS
                B3  88 sefelvvkvfr 98 
                       ++ +l+++++ 
  TRIDC5BG006630.5 137 DNNQLLLGIRH 147
                       67777888876 PP
2Auxin_resp117.51.2e-38173256183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+t+s F+++YnPras+seF+++++k++k+++ ++vsvGmRf+m fete+ss rr++Gt++ +sdld+vrWpnS+Wrs+k
  TRIDC5BG006630.5 173 AAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKSVYhTRVSVGMRFRMLFETEESSVRRYMGTITTISDLDSVRWPNSHWRSVK 256
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 807 aa     Download sequence    
MSPCMADAET DEVYAQMTLQ PLSPEEQKEP FLPIELGAAS KQPTNYFCKT LTASDTSTHG  60
GFSVPRRSAE KVFPPLDFSL QPPCQELIAK DLHDNEWKFR HIFRGQPKRH LLTTGWSVFV  120
SAKRLVAGDS VIFIWNDNNQ LLLGIRHANR PQTIMPSSVL SSDSMHIGLL AAAAHAAATN  180
SRFTIFYNPR ASPSEFIIPL AKYVKSVYHT RVSVGMRFRM LFETEESSVR RYMGTITTIS  240
DLDSVRWPNS HWRSVKVGWD ESTAGEKQPR VSLWEIEPLT TFPMYPTAFP LRLKRPWASG  300
LPSMHGMFNG VKNDDFARYS SLMWLGDGDR GAQSLNFQGV GASPWLQPRI DSPLLGLKPD  360
TYQQMAAAAL EEIRTGDPSK QSSALLQFQQ TQNPNGGLNS VYANHVLQQM QYQAQQSSLQ  420
TVQHGHCQYS GNPGFLQSQF EQLHLHNPPA PPQQGYQVIQ QSHQEMQQQL SSGCRRISDV  480
DSSMPGSESA SQSQSSFYQQ NLLEGNNDPS LHLHNGFRNF SSQDSSNLVS LPRTDQLMAP  540
EGWPSKRLAV EPLGHIESRS MQPKHENINH QSNMSHFAGT LAPQSARDSS SVQAYGANAD  600
NQFLSSTFAF QDGMAGARGG SSSRTVSMAI PLLRYSGEDL PPADTLATSS CLGESGTFNS  660
LDNMCGVNPS QDGTFVKVYK SGSPGRSLDI TKFSSYYELR SELEHLFGLE GQLEDPVRSG  720
WQLVFVDREN DILLVGDDPW QEFVNSVGCI KILSQQEVQQ MVRGGEGLVS SAPGARMAQG  780
NVCDGYSGGH DLQNLTGNMA SVPPLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein