PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG006630.16
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 837aa    MW: 92433.3 Da    PI: 6.1855
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG006630.16genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.62.3e-2377177198
                        EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                        f+k+lt sd++++g +++p++ ae+       +++++++ +l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC5BG006630.16  77 FCKTLTASDTSTHGGFSVPRRSAEKVfppldfSLQPPCQ-ELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFI--W 165
                        99******************************9999996.9************************************************..6 PP

                        SSEE..EEEEE- CS
                 B3  87 rsefelvvkvfr 98 
                        +++ +l+++++ 
  TRIDC5BG006630.16 166 NDNNQLLLGIRH 177
                        767777888875 PP
2Auxin_resp117.41.2e-38203286183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaa+t+s F+++YnPras+seF+++++k++k+++ ++vsvGmRf+m fete+ss rr++Gt++ +sdld+vrWpnS+Wrs+k
  TRIDC5BG006630.16 203 AAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKSVYhTRVSVGMRFRMLFETEESSVRRYMGTITTISDLDSVRWPNSHWRSVK 286
                        79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 837 aa     Download sequence    
AEVAASTNKE VDAQIPNYPN LPPQLICQLH NVTMHADAET DEVYAQMTLQ PLSPEEQKEP  60
FLPIELGAAS KQPTNYFCKT LTASDTSTHG GFSVPRRSAE KVFPPLDFSL QPPCQELIAK  120
DLHDNEWKFR HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VIFIWNDNNQ LLLGIRHANR  180
PQTIMPSSVL SSDSMHIGLL AAAAHAAATN SRFTIFYNPR ASPSEFIIPL AKYVKSVYHT  240
RVSVGMRFRM LFETEESSVR RYMGTITTIS DLDSVRWPNS HWRSVKVGWD ESTAGEKQPR  300
VSLWEIEPLT TFPMYPTAFP LRLKRPWASG LPSMHGMFNG VKNDDFARYS SLMWLGDGDR  360
GAQSLNFQGV GASPWLQPRI DSPLLGLKPD TYQQMAAAAL EEIRTGDPSK QSSALLQFQQ  420
TQNPNGGLNS VYANHVLQQM QYQAQQSSLQ TVQHGHCQYS GNPGFLQSQF EQLHLHNPPA  480
PPQQGYQVIQ QSHQEMQQQL SSGCRRISDV DSSMPGSESA SQSQSSFYQQ NLLEGNNDPS  540
LHLHNGFRNF SSQDSSNLVS LPRTDQLMAP EGWPSKRLAV EPLGHIESRS MQPKHENINH  600
QSNMSHFAGT LAPQSARDSS SVQAYGANAD NQFLSSTFAF QDGMAGARGG SSSRTVSMAI  660
PLLRYSGEDL PPADTLATSS CLGESGTFNS LDNMCGVNPS QDGTFVKVYK SGSPGRSLDI  720
TKFSSYYELR SELEHLFGLE GQLEDPVRSG WQLVFVDREN DILLVGDDPW QEFVNSVGCI  780
KILSQQEVQQ MVRGGEGLVS SAPGARMAQG NVCDGYSGGH DLQNLTGNMA SVPPLDY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein