PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG006630.14
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 892aa    MW: 98396.2 Da    PI: 6.3641
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG006630.14genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.52.5e-23132232198
                        EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                        f+k+lt sd++++g +++p++ ae+       +++++++ +l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC5BG006630.14 132 FCKTLTASDTSTHGGFSVPRRSAEKVfppldfSLQPPCQ-ELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFI--W 220
                        99******************************9999996.9************************************************..6 PP

                        SSEE..EEEEE- CS
                 B3  87 rsefelvvkvfr 98 
                        +++ +l+++++ 
  TRIDC5BG006630.14 221 NDNNQLLLGIRH 232
                        767777888875 PP
2Auxin_resp117.31.3e-38258341183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaa+t+s F+++YnPras+seF+++++k++k+++ ++vsvGmRf+m fete+ss rr++Gt++ +sdld+vrWpnS+Wrs+k
  TRIDC5BG006630.14 258 AAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKSVYhTRVSVGMRFRMLFETEESSVRRYMGTITTISDLDSVRWPNSHWRSVK 341
                        79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 892 aa     Download sequence    
CHSLCLLPVA TSCLCPSTNR EQRCLNSELW HACAGPLVSL PAVGSRVIYF PQGHSEQVAA  60
STNKEVDAQI PNYPNLPPQL ICQLHNVTMH ADAETDEVYA QMTLQPLSPE EQKEPFLPIE  120
LGAASKQPTN YFCKTLTASD TSTHGGFSVP RRSAEKVFPP LDFSLQPPCQ ELIAKDLHDN  180
EWKFRHIFRG QPKRHLLTTG WSVFVSAKRL VAGDSVIFIW NDNNQLLLGI RHANRPQTIM  240
PSSVLSSDSM HIGLLAAAAH AAATNSRFTI FYNPRASPSE FIIPLAKYVK SVYHTRVSVG  300
MRFRMLFETE ESSVRRYMGT ITTISDLDSV RWPNSHWRSV KVGWDESTAG EKQPRVSLWE  360
IEPLTTFPMY PTAFPLRLKR PWASGLPSMH GMFNGVKNDD FARYSSLMWL GDGDRGAQSL  420
NFQGVGASPW LQPRIDSPLL GLKPDTYQQM AAAALEEIRT GDPSKQSSAL LQFQQTQNPN  480
GGLNSVYANH VLQQMQYQAQ QSSLQTVQHG HCQYSGNPGF LQSQFEQLHL HNPPAPPQQG  540
YQVIQQSHQE MQQQLSSGCR RISDVDSSMP GSESASQSQS SFYQQNLLEG NNDPSLHLHN  600
GFRNFSSQDS SNLVSLPRTD QLMAPEGWPS KRLAVEPLGH IESRSMQPKH ENINHQSNMS  660
HFAGTLAPQS ARDSSSVQAY GANADNQFLS STFAFQDGMA GARGGSSSRT VSMAIPLLRY  720
SGEDLPPADT LATSSCLGES GTFNSLDNMC GVNPSQDGTF VKVYKSGSPG RSLDITKFSS  780
YYELRSELEH LFGLEGQLED PVRSGWQLVF VDRENDILLV GDDPWQEFVN SVGCIKILSQ  840
QEVQQMVRGG EGLVSSAPGA RMAQGNVCDG YSGGHDLQNL TGNMASVPPL DY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein