PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG006630.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 891aa    MW: 98457.1 Da    PI: 6.1457
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG006630.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.52.5e-23131231198
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                       f+k+lt sd++++g +++p++ ae+       +++++++ +l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++
  TRIDC5BG006630.1 131 FCKTLTASDTSTHGGFSVPRRSAEKVfppldfSLQPPCQ-ELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFI--WN 220
                       99******************************9999996.9************************************************..67 PP

                       SEE..EEEEE- CS
                B3  88 sefelvvkvfr 98 
                       ++ +l+++++ 
  TRIDC5BG006630.1 221 DNNQLLLGIRH 231
                       67777888875 PP
2Auxin_resp117.31.3e-38257340183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaa+t+s F+++YnPras+seF+++++k++k+++ ++vsvGmRf+m fete+ss rr++Gt++ +sdld+vrWpnS+Wrs+k
  TRIDC5BG006630.1 257 AAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKSVYhTRVSVGMRFRMLFETEESSVRRYMGTITTISDLDSVRWPNSHWRSVK 340
                       79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 891 aa     Download sequence    
MERKLSMSEM PQSLPENDGE QRCLNSELWH ACAGPLVSLP AVGSRVIYFP QGHSEQVAAS  60
TNKEVDAQIP NYPNLPPQLI CQLHNVTMHA DAETDEVYAQ MTLQPLSPEE QKEPFLPIEL  120
GAASKQPTNY FCKTLTASDT STHGGFSVPR RSAEKVFPPL DFSLQPPCQE LIAKDLHDNE  180
WKFRHIFRGQ PKRHLLTTGW SVFVSAKRLV AGDSVIFIWN DNNQLLLGIR HANRPQTIMP  240
SSVLSSDSMH IGLLAAAAHA AATNSRFTIF YNPRASPSEF IIPLAKYVKS VYHTRVSVGM  300
RFRMLFETEE SSVRRYMGTI TTISDLDSVR WPNSHWRSVK VGWDESTAGE KQPRVSLWEI  360
EPLTTFPMYP TAFPLRLKRP WASGLPSMHG MFNGVKNDDF ARYSSLMWLG DGDRGAQSLN  420
FQGVGASPWL QPRIDSPLLG LKPDTYQQMA AAALEEIRTG DPSKQSSALL QFQQTQNPNG  480
GLNSVYANHV LQQMQYQAQQ SSLQTVQHGH CQYSGNPGFL QSQFEQLHLH NPPAPPQQGY  540
QVIQQSHQEM QQQLSSGCRR ISDVDSSMPG SESASQSQSS FYQQNLLEGN NDPSLHLHNG  600
FRNFSSQDSS NLVSLPRTDQ LMAPEGWPSK RLAVEPLGHI ESRSMQPKHE NINHQSNMSH  660
FAGTLAPQSA RDSSSVQAYG ANADNQFLSS TFAFQDGMAG ARGGSSSRTV SMAIPLLRYS  720
GEDLPPADTL ATSSCLGESG TFNSLDNMCG VNPSQDGTFV KVYKSGSPGR SLDITKFSSY  780
YELRSELEHL FGLEGQLEDP VRSGWQLVFV DRENDILLVG DDPWQEFVNS VGCIKILSQQ  840
EVQQMVRGGE GLVSSAPGAR MAQGNVCDGY SGGHDLQNLT GNMASVPPLD Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein