PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG004480.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YA | ||||||||
Protein Properties | Length: 178aa MW: 19693.2 Da PI: 10.0777 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 93.5 | 2.6e-29 | 16 | 69 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d+p+YVNaKQy++Il+RR +Rak+e+e++l kpylheSRh hA+rR+RgsgGrF TRIDC5BG004480.4 16 DAPIYVNAKQYEGILRRRRARAKAEKENRL----VKPYLHESRHLHAMRRARGSGGRF 69 68****************************....9**********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
LLSSGRMLIP LNMPADAPIY VNAKQYEGIL RRRRARAKAE KENRLVKPYL HESRHLHAMR 60 RARGSGGRFL NTKKETNGKD TGVGSKAMAG NPLMRPAASL SSEIQHSEQG NRSSVSSLSG 120 SEVTSLYDHE DVDHYHNFEH LRTHFFTPLP SIMDGEHGAG NPFKWAAASD GCCNLLKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06510.3 | 3e-25 | NF-YA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG004480.4 |