PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG004480.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YA | ||||||||
Protein Properties | Length: 103aa MW: 11369.7 Da PI: 9.3336 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 42.1 | 2.9e-13 | 76 | 103 | 1 | 28 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeek 28 d+p+YVNaKQy++Il+RR +Rak+e+e+ TRIDC5BG004480.2 76 DAPIYVNAKQYEGILRRRRARAKAEKEN 103 68***********************975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 103 aa Download sequence |
MVHLGSGKGG NSSEHSAPIT LQSPFTEYND HFELGLGQSV ISSNYYSDQQ YGLLSSYGMR 60 SASSGRMLIP LNMPADAPIY VNAKQYEGIL RRRRARAKAE KEN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G05690.1 | 3e-11 | NF-YA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG004480.2 |