PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG003960.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 191aa MW: 21085.7 Da PI: 9.0296 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 227.9 | 2.5e-70 | 9 | 178 | 6 | 170 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqll..aaeshldeslkee..lleelkveeenlksnv..ekeesa 92 +e+vCyv+CnfCnt+lavsvP +s++++vtvrCGhCt+llsv+l+ +++ +a ++ sl ++ +++++ ++s + ++++s+ TRIDC5BG003960.4 9 PAEEVCYVHCNFCNTVLAVSVPGNSMLNIVTVRCGHCTNLLSVSLRGQMHSPvpPAAQE--SSLSKPngSNGFIRDHGSVYNSPEfgSSSSSS 99 6899*****************************************98886531133333..33332224333345555555544311334444 PP YABBY 93 stsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 s++ ++ ++ + ++++ + + rPPekrqrvPsaynrfikeei+rika+nPdishreafs+aaknWah+P+ihfgl TRIDC5BG003960.4 100 SSKFRMPTMMFSPQNDLLQEQTlHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL 178 4455555555555555555544479****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MSSSGQITPA EEVCYVHCNF CNTVLAVSVP GNSMLNIVTV RCGHCTNLLS VSLRGQMHSP 60 VPPAAQESSL SKPNGSNGFI RDHGSVYNSP EFGSSSSSSS SKFRMPTMMF SPQNDLLQEQ 120 TLHARPPEKR QRVPSAYNRF IKEEIRRIKA NNPDISHREA FSTAAKNWAH YPNIHFGLNP 180 ERDGGKRLAV D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 9e-60 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG003960.4 |