PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG003960.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 194aa MW: 21830.3 Da PI: 10.4068 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 133.2 | 3.4e-41 | 84 | 167 | 88 | 170 |
YABBY 88 keesastsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++s+s++ ++ ++ + ++++ + + rPPekrqrvPsaynrfikeei+rika+nPdishreafs+aaknWah+P+ihfgl TRIDC5BG003960.3 84 SSSSSSSKFRMPTMMFSPQNDLLQEQTlHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL 167 344455555555565555555555544479****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence |
VVGPDHTGRR SLLRALQLLQ HRTRGECPWE QHAQHRDSPV RALHKPAFGE PERADESSLS 60 KPNGSNGFIR DHGSVYNSPE FGSSSSSSSS KFRMPTMMFS PQNDLLQEQT LHARPPEKRQ 120 RVPSAYNRFI KEEIRRIKAN NPDISHREAF STAAKNWAHY PNIHFGLNPE RDGGKRLAVD 180 DAAPAAKKIQ GFCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 2e-35 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG003960.3 |