PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG003960.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | YABBY | ||||||||
Protein Properties | Length: 204aa MW: 22369.2 Da PI: 9.0793 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 229 | 1.2e-70 | 7 | 177 | 6 | 170 |
YABBY 6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasql.laaeshldeslkee.....lleelkveeenlksnv..ekee 90 +e+vCyv+CnfCnt+lavsvP +s++++vtvrCGhCt+llsv+l+ +++ ++ +l+ sl ++ +++++ ++s + ++++ TRIDC5BG003960.2 7 PAEEVCYVHCNFCNTVLAVSVPGNSMLNIVTVRCGHCTNLLSVSLRGQMHSpVPPAAQLESSLSKPngsngF---IRDHGSVYNSPEfgSSSS 96 6899*****************************************988754267778899998877453332...455555555444113344 PP YABBY 91 sastsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 s+s++ ++ ++ + ++++ + + rPPekrqrvPsaynrfikeei+rika+nPdishreafs+aaknWah+P+ihfgl TRIDC5BG003960.2 97 SSSSKFRMPTMMFSPQNDLLQEQTlHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL 177 444455555565555556555544479****************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
SSGQITPAEE VCYVHCNFCN TVLAVSVPGN SMLNIVTVRC GHCTNLLSVS LRGQMHSPVP 60 PAAQLESSLS KPNGSNGFIR DHGSVYNSPE FGSSSSSSSS KFRMPTMMFS PQNDLLQEQT 120 LHARPPEKRQ RVPSAYNRFI KEEIRRIKAN NPDISHREAF STAAKNWAHY PNIHFGLNPE 180 RDGGKRLAVD DAAPAAKKIQ GFCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G26580.1 | 3e-59 | YABBY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG003960.2 |