PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC5BG002550.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 197aa MW: 22748.5 Da PI: 7.1474 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 24.9 | 3.5e-08 | 142 | 175 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++ee+++L +++gL+ +q+ +WF N+R + TRIDC5BG002550.3 142 KWPYPTEEEKARLVQETGLQLKQINNWFINQRKR 175 569*****************************87 PP | |||||||
2 | ELK | 30.2 | 1e-10 | 96 | 117 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ TRIDC5BG002550.3 96 ELKHELKQGYREKLVDIREEIL 117 9*******************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 197 aa Download sequence |
MTHYVLLLCS FKEQLQQHVR VHAMEAVMAC WELEQTLQSL TGASPGEGTG ATMSDDEDNP 60 VDSESNMFDG NDVSDGKGFG MLTEGERSLV ERVRQELKHE LKQGYREKLV DIREEILRKR 120 RAGKLPGDTA STLKAWWQAH AKWPYPTEEE KARLVQETGL QLKQINNWFI NQRKRNWHSN 180 PTSSSSDKSK RKRYDDR |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 173 | 193 | RKRNWHSNPTSSSSDKSKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G25220.2 | 1e-113 | TALE family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC5BG002550.3 |