PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG002550.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TALE | ||||||||
Protein Properties | Length: 174aa MW: 19985.2 Da PI: 6.2948 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 25.2 | 2.8e-08 | 119 | 152 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++ee+++L +++gL+ +q+ +WF N+R + TRIDC5BG002550.2 119 KWPYPTEEEKARLVQETGLQLKQINNWFINQRKR 152 569*****************************87 PP | |||||||
2 | ELK | 30.4 | 8.5e-11 | 73 | 94 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ TRIDC5BG002550.2 73 ELKHELKQGYREKLVDIREEIL 94 9*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MEAVMACWEL EQTLQSLTGA SPGEGTGATM SDDEDNPVDS ESNMFDGNDV SDGKGFGMLT 60 EGERSLVERV RQELKHELKQ GYREKLVDIR EEILRKRRAG KLPGDTASTL KAWWQAHAKW 120 PYPTEEEKAR LVQETGLQLK QINNWFINQR KRNWHSNPTS SSSDKSKRKR YDDR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 150 | 170 | RKRNWHSNPTSSSSDKSKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.2 | 6e-94 | TALE family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG002550.2 |