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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC5BG000790.9 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | MYB_related | ||||||||
| Protein Properties | Length: 1123aa MW: 124082 Da PI: 8.9861 | ||||||||
| Description | MYB_related family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Myb_DNA-binding | 23.7 | 1.1e-07 | 8 | 43 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
W+++E e+++ a +++G++ W+++a + Rt ++
TRIDC5BG000790.9 8 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 43
6*****************99.******999.9997665 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 1123 aa Download sequence |
KLSDLGSQWS KDELERFYAA YRKYGKDWRK VAGAVHDRTS DMVEALYNMN RAYLSLPEGT 60 ATAAGLIAMM TDHYNILDGS NSDHESNGSP KTSRKPQKRG RAKLQSVSKA SDTRYPDLLQ 120 SQPASSSYGC LSLLKKKRSG DLFVGNKPRA VGKRTPRVPV ASMYHRDDKA GPSNRQAKPD 180 ANNGDEEGAL AALALAEVCQ RGSPQVSQTS GRSSGQLFLS PGKSIDRKNA DSEMGSSKMH 240 GFQVDTDYPE GSLGSREAET ADYPKDASYF LNNEGSASGK SKPKVKRSQK RRKKAAHKTD 300 DQFEDDREAC SGTEEGCSSR KAKDISELDV FGSKGSWPSN KSNKRSRQLF FGDELSALDA 360 LHTLADISVN ILQPSSIAES ESSAQFKDGS KDNESDDKPS VPAAVSLFDK KDKPRKTKKI 420 KRQSEIASNE VVTRKKARLS KDHHHDGSTS EVKQDDCKCG VKMEKKKRKS STLKISKDEK 480 NTLKDSEKTE ASAEEGKVSS NKGRHAHVSP VSKQNKSKAQ ESSPAHADFG KEAMDAVDTT 540 ENAITQQSDS ASKSKSRRKL GILKALAPES KPAEGADDSC DNVSYPVNNA IELKDKLSHC 600 LSSRFLRRWC MSEWFYSAID YPWFAKSEFV EYLNHVKLGH VPRLTRVEWG VIRSSLGKPR 660 RLSKQFLQEE REKLSQYRES VRQHYAELQS GVREGLPTDL ARPLAVGQRV IACHPKTREL 720 HDGSVLTVDR NRCRVQFDRP ELGVEFVMDI DCMPLHPLEN FPESLRRQNI VNKYYSSFSE 780 VKFEDRSKEY GGGGAPRFIP NAKTTANEAT VAAHQAMYGQ PCTLSQIQER EADIRALAEL 840 SRALDKKEAL LVELRHMNEE VSGKQKDGEI IRDLEHFRKQ YAMVLVQLRD SNDHVASALL 900 CLRQRNTFHG QPTQSYPNKS TENGGAFNRT PDPSSNLFGY INQESGSQVM EIIETSRSKA 960 KTMVDVAVQA MCKVSEGENA FAKIGEALDN LNLRGTGSGS SILGIRRIPP DSGQANSDNC 1020 AAGRFDPAAA ANNISSPRVL PNGSDSDAQF PSELISSCVA TILMIQNCTE KQYHPAEVAH 1080 ILDSALSRLQ PCSSQNVPIF REIEMCMGII KNQMLALIPT PSG |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 282 | 294 | KPKVKRSQKRRKK |
| 2 | 285 | 291 | VKRSQKR |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT3G21430.2 | 0.0 | MYB_related family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC5BG000790.9 |
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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