PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG000790.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 871aa MW: 96721 Da PI: 9.5821

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG000790.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.1	8.4e-08	9	44	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5BG000790.8 9 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 44 6***************99.****999.9997665 PP

Sequence ? help Back to Top
Protein Sequence Length: 871 aa Download sequence
KKLSDLGSQW SKDELERFYA AYRKYGKDWR KVAGAVHDRT SDMVEALYNM NRAYLSLPEG 60 TATAAGLIAM MTDHYNILDG SNSDHESNGS PKTSRKPQKR GRAKLQSVSK ASDTRYPDLL 120 QSQPASSSYG CLSLLKKKRS GGNKPRAVGK RTPRVPVASM YHRDDKAGPS NRQAKPDANN 180 GDEEGALAAL ALAEVCQRGS PQVSQTSGRS SGQLFLSPGK SIDRKNADSE MGSSKMHGFQ 240 VDTDYPEGSL GSREAETADY PKDASYFLNN EGSASGKSKP KVKRSQKRRK KAAHKTDDQF 300 EDDREACSGT EEGCSSRKAK DISELDVFGS KGSWPSNKSN KRSRQLFFGD ELSALDALHT 360 LADISVNILQ PSSIAESESS AQFKDGSKDN ESDDKPSVPA AVSLFDKKDK PRKTKKIKRQ 420 SEIASNEVVT RKKARLSKDH HHDGSTSEVK QDDCKCGVKM EKKKRKSSTL KISKDEKNTL 480 KDSEKTEASA EEGKVSSNKG RHAHVSPVSK QNKSKAQESS PAHADFGKEA MDAVDTTENA 540 ITQQSDSASK SKSRRKLGIL KALAPESKPA EGADDSCDNV SYPVNNAIEL KDKLSHCLSS 600 RFLRRWCMSE WFYSAIDYPW FAKSEFVEYL NHVKLGHVPR LTRVEWGVIR SSLGKPRRLS 660 KQFLQEEREK LSQYRESVRQ HYAELQSGVR EGLPTDLARP LAVGQRVIAC HPKTRELHDG 720 SVLTVDRNRC RVQFDRPELG VEFVMDIDCM PLHPLENFPE SLRRQNIVNK YYSSFSEVKF 780 EDRSKEYGGG GAPRFIPNGD AFDSTAQAKT TANEATVAAH QAMYGQPCTL SQIQEREADI 840 RALAELSRAL DKKEALLVEL RHMNEEVSGK Q

Sequence ? help Back to Top

Protein Sequence Length: 871 aa Download sequence

KKLSDLGSQW SKDELERFYA AYRKYGKDWR KVAGAVHDRT SDMVEALYNM NRAYLSLPEG  60
TATAAGLIAM MTDHYNILDG SNSDHESNGS PKTSRKPQKR GRAKLQSVSK ASDTRYPDLL  120
QSQPASSSYG CLSLLKKKRS GGNKPRAVGK RTPRVPVASM YHRDDKAGPS NRQAKPDANN  180
GDEEGALAAL ALAEVCQRGS PQVSQTSGRS SGQLFLSPGK SIDRKNADSE MGSSKMHGFQ  240
VDTDYPEGSL GSREAETADY PKDASYFLNN EGSASGKSKP KVKRSQKRRK KAAHKTDDQF  300
EDDREACSGT EEGCSSRKAK DISELDVFGS KGSWPSNKSN KRSRQLFFGD ELSALDALHT  360
LADISVNILQ PSSIAESESS AQFKDGSKDN ESDDKPSVPA AVSLFDKKDK PRKTKKIKRQ  420
SEIASNEVVT RKKARLSKDH HHDGSTSEVK QDDCKCGVKM EKKKRKSSTL KISKDEKNTL  480
KDSEKTEASA EEGKVSSNKG RHAHVSPVSK QNKSKAQESS PAHADFGKEA MDAVDTTENA  540
ITQQSDSASK SKSRRKLGIL KALAPESKPA EGADDSCDNV SYPVNNAIEL KDKLSHCLSS  600
RFLRRWCMSE WFYSAIDYPW FAKSEFVEYL NHVKLGHVPR LTRVEWGVIR SSLGKPRRLS  660
KQFLQEEREK LSQYRESVRQ HYAELQSGVR EGLPTDLARP LAVGQRVIAC HPKTRELHDG  720
SVLTVDRNRC RVQFDRPELG VEFVMDIDCM PLHPLENFPE SLRRQNIVNK YYSSFSEVKF  780
EDRSKEYGGG GAPRFIPNGD AFDSTAQAKT TANEATVAAH QAMYGQPCTL SQIQEREADI  840
RALAELSRAL DKKEALLVEL RHMNEEVSGK Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	279	291	KPKVKRSQKRRKK
2	282	288	VKRSQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG000790.8