PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG000790.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 876aa MW: 97323.8 Da PI: 9.5796

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG000790.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.1	8.5e-08	10	45	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5BG000790.7 10 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 45 6***************99.****999.9997665 PP

Sequence ? help Back to Top
Protein Sequence Length: 876 aa Download sequence
KKKLSDLGSQ WSKDELERFY AAYRKYGKDW RKVAGAVHDR TSDMVEALYN MNRAYLSLPE 60 GTATAAGLIA MMTDHYNILD GSNSDHESNG SPKTSRKPQK RGRAKLQSVS KASDTRYPDL 120 LQSQPASSSY GCLSLLKKKR SGDLFVGNKP RAVGKRTPRV PVASMYHRDD KAGPSNRQAK 180 PDANNGDEEG ALAALALAEV CQRGSPQVSQ TSGRSSGQLF LSPGKSIDRK NADSEMGSSK 240 MHGFQVDTDY PEGSLGSREA ETADYPKDAS YFLNNEGSAS GKSKPKVKRS QKRRKKAAHK 300 TDDQFEDDRE ACSGTEEGCS SRKAKDISEL DVFGSKGSWP SNKSNKRSRQ LFFGDELSAL 360 DALHTLADIS VNILQPSSIA ESESSAQFKD GSKDNESDDK PSVPAAVSLF DKKDKPRKTK 420 KIKRQSEIAS NEVVTRKKAR LSKDHHHDGS TSEVKQDDCK CGVKMEKKKR KSSTLKISKD 480 EKNTLKDSEK TEASAEEGKV SSNKGRHAHV SPVSKQNKSK AQESSPAHAD FGKEAMDAVD 540 TTENAITQQS DSASKSKSRR KLGILKALAP ESKPAEGADD SCDNVSYPVN NAIELKDKLS 600 HCLSSRFLRR WCMSEWFYSA IDYPWFAKSE FVEYLNHVKL GHVPRLTRVE WGVIRSSLGK 660 PRRLSKQFLQ EEREKLSQYR ESVRQHYAEL QSGVREGLPT DLARPLAVGQ RVIACHPKTR 720 ELHDGSVLTV DRNRCRVQFD RPELGVEFVM DIDCMPLHPL ENFPESLRRQ NIVNKYYSSF 780 SEVKFEDRSK EYGGGGAPRF IPNGDAFDST AQAKTTANEA TVAAHQAMYG QPCTLSQIQE 840 READIRALAE LSRALDKKEA LLVELRHMNE EVSGKQ

Sequence ? help Back to Top

Protein Sequence Length: 876 aa Download sequence

KKKLSDLGSQ WSKDELERFY AAYRKYGKDW RKVAGAVHDR TSDMVEALYN MNRAYLSLPE  60
GTATAAGLIA MMTDHYNILD GSNSDHESNG SPKTSRKPQK RGRAKLQSVS KASDTRYPDL  120
LQSQPASSSY GCLSLLKKKR SGDLFVGNKP RAVGKRTPRV PVASMYHRDD KAGPSNRQAK  180
PDANNGDEEG ALAALALAEV CQRGSPQVSQ TSGRSSGQLF LSPGKSIDRK NADSEMGSSK  240
MHGFQVDTDY PEGSLGSREA ETADYPKDAS YFLNNEGSAS GKSKPKVKRS QKRRKKAAHK  300
TDDQFEDDRE ACSGTEEGCS SRKAKDISEL DVFGSKGSWP SNKSNKRSRQ LFFGDELSAL  360
DALHTLADIS VNILQPSSIA ESESSAQFKD GSKDNESDDK PSVPAAVSLF DKKDKPRKTK  420
KIKRQSEIAS NEVVTRKKAR LSKDHHHDGS TSEVKQDDCK CGVKMEKKKR KSSTLKISKD  480
EKNTLKDSEK TEASAEEGKV SSNKGRHAHV SPVSKQNKSK AQESSPAHAD FGKEAMDAVD  540
TTENAITQQS DSASKSKSRR KLGILKALAP ESKPAEGADD SCDNVSYPVN NAIELKDKLS  600
HCLSSRFLRR WCMSEWFYSA IDYPWFAKSE FVEYLNHVKL GHVPRLTRVE WGVIRSSLGK  660
PRRLSKQFLQ EEREKLSQYR ESVRQHYAEL QSGVREGLPT DLARPLAVGQ RVIACHPKTR  720
ELHDGSVLTV DRNRCRVQFD RPELGVEFVM DIDCMPLHPL ENFPESLRRQ NIVNKYYSSF  780
SEVKFEDRSK EYGGGGAPRF IPNGDAFDST AQAKTTANEA TVAAHQAMYG QPCTLSQIQE  840
READIRALAE LSRALDKKEA LLVELRHMNE EVSGKQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	284	296	KPKVKRSQKRRKK
2	287	293	VKRSQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG000790.7