PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG000790.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 1116aa MW: 123470 Da PI: 8.8187

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG000790.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.7	1.1e-07	13	48	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5BG000790.5 13 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 48 6***************99.****999.9997665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1116 aa Download sequence
MPYKKKLSDL GSQWSKDELE RFYAAYRKYG KDWRKVAGAV HDRTSDMVEA LYNMNRAYLS 60 LPEGTATAAG LIAMMTDHYN ILDGSNSDHE SNGSPKTSRK PQKRGRAKLQ SVSKASDTRY 120 PDLLQSQPAS SSYGCLSLLK KKRSGDLFVG NKPRAVGKRT PRVPVASMYH RDDKAGPSNR 180 QAKPDANNGD EEGALAALAL AEVCQRGSPQ VSQTSGRSSG QLFLSPGKSI DRKNADSEMG 240 SSKMHGFQVD TDYPEGSLGS REAETADYPK DASYFLNNEG SASGKSKPKV KRSQKRRKKA 300 AHKTDDQFED DREACSGTEE GCSSRKAKDI SELDVFGSKG SWPSNKSNKR SRQLFFGDEL 360 SALDALHTLA DISVNILQPS SIAESESSAQ FKDGSKDNES DDKPSVPAAV SLFDKKDKPR 420 KTKKIKRQSE IASNEVVTRK KARLSKDHHH DGSTSEVKQD DCKCGVKMEK KKRKSSTLKI 480 SKDEKNTLKD SEKTEASAEE GKVSSNKAMD AVDTTENAIT QQSDSASKSK SRRKLGILKA 540 LAPESKPAEG ADDSCDNVSY PVNNAIELKD KLSHCLSSRF LRRWCMSEWF YSAIDYPWFA 600 KSEFVEYLNH VKLGHVPRLT RVEWGVIRSS LGKPRRLSKQ FLQEEREKLS QYRESVRQHY 660 AELQSGVREG LPTDLARPLA VGQRVIACHP KTRELHDGSV LTVDRNRCRV QFDRPELGVE 720 FVMDIDCMPL HPLENFPESL RRQNIVNKYY SSFSEVKFED RSKEYGGGGA PRFIPNVSFH 780 SCLTVPSQGD AFDSTAQAKT TANEATVAAH QAMYGQPCTL SQIQEREADI RALAELSRAL 840 DKKEALLVEL RHMNEEVSGK QKDGEIIRDL EHFRKQYAMV LVQLRDSNDH VASALLCLRQ 900 RNTFHGQPTQ SYPNKSTENG GAFNRTPDPS SNLFGYINQE SGSQVMEIIE TSRSKAKTMV 960 DVAVQAMCKV SEGENAFAKI GEALDNLNLR GTGSGSSILG IRRIPPDSGQ ANSDNCAAGR 1020 FDPAAAANNI SSPRVLPNGS DSDAQFPSEL ISSCVATILM IQNCTEKQYH PAEVAHILDS 1080 ALSRLQPCSS QNVPIFREIE MCMGIIKNQM LALIPT

Sequence ? help Back to Top

Protein Sequence Length: 1116 aa Download sequence

MPYKKKLSDL GSQWSKDELE RFYAAYRKYG KDWRKVAGAV HDRTSDMVEA LYNMNRAYLS  60
LPEGTATAAG LIAMMTDHYN ILDGSNSDHE SNGSPKTSRK PQKRGRAKLQ SVSKASDTRY  120
PDLLQSQPAS SSYGCLSLLK KKRSGDLFVG NKPRAVGKRT PRVPVASMYH RDDKAGPSNR  180
QAKPDANNGD EEGALAALAL AEVCQRGSPQ VSQTSGRSSG QLFLSPGKSI DRKNADSEMG  240
SSKMHGFQVD TDYPEGSLGS REAETADYPK DASYFLNNEG SASGKSKPKV KRSQKRRKKA  300
AHKTDDQFED DREACSGTEE GCSSRKAKDI SELDVFGSKG SWPSNKSNKR SRQLFFGDEL  360
SALDALHTLA DISVNILQPS SIAESESSAQ FKDGSKDNES DDKPSVPAAV SLFDKKDKPR  420
KTKKIKRQSE IASNEVVTRK KARLSKDHHH DGSTSEVKQD DCKCGVKMEK KKRKSSTLKI  480
SKDEKNTLKD SEKTEASAEE GKVSSNKAMD AVDTTENAIT QQSDSASKSK SRRKLGILKA  540
LAPESKPAEG ADDSCDNVSY PVNNAIELKD KLSHCLSSRF LRRWCMSEWF YSAIDYPWFA  600
KSEFVEYLNH VKLGHVPRLT RVEWGVIRSS LGKPRRLSKQ FLQEEREKLS QYRESVRQHY  660
AELQSGVREG LPTDLARPLA VGQRVIACHP KTRELHDGSV LTVDRNRCRV QFDRPELGVE  720
FVMDIDCMPL HPLENFPESL RRQNIVNKYY SSFSEVKFED RSKEYGGGGA PRFIPNVSFH  780
SCLTVPSQGD AFDSTAQAKT TANEATVAAH QAMYGQPCTL SQIQEREADI RALAELSRAL  840
DKKEALLVEL RHMNEEVSGK QKDGEIIRDL EHFRKQYAMV LVQLRDSNDH VASALLCLRQ  900
RNTFHGQPTQ SYPNKSTENG GAFNRTPDPS SNLFGYINQE SGSQVMEIIE TSRSKAKTMV  960
DVAVQAMCKV SEGENAFAKI GEALDNLNLR GTGSGSSILG IRRIPPDSGQ ANSDNCAAGR  1020
FDPAAAANNI SSPRVLPNGS DSDAQFPSEL ISSCVATILM IQNCTEKQYH PAEVAHILDS  1080
ALSRLQPCSS QNVPIFREIE MCMGIIKNQM LALIPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	287	299	KPKVKRSQKRRKK
2	290	296	VKRSQKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	1e-167	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG000790.5