PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG000790.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 788aa MW: 87733.2 Da PI: 9.7252 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.3 | 7.5e-08 | 13 | 48 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5BG000790.4 13 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 48 6*****************99.******999.9997665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 788 aa Download sequence |
MPYKKKLSDL GSQWSKDELE RFYAAYRKYG KDWRKVAGAV HDRTSDMVEA LYNMNRAYLS 60 LPEGTATAAG LIAMMTDHYN ILDGSNSDHE SNGSPKTSRK PQKRGRAKLQ SVSKASDTRY 120 PDLLQSQPAS SSYGCLSLLK KKRSGDLFVG NKPRAVGKRT PRVPVASMYH RDDKAGPSNR 180 QAKPDANNGD EEGALAALAL AEVCQRGSPQ VSQTSGRSSG QLFLSPGKSI DRKNADSEMG 240 SSKMHGFQVD TDYPEGSLGS REAETADYPK DASYFLNNEG SASGKSKPKV KRSQKRRKKA 300 AHKTDDQFED DREACSGTEE GCSSRKAKDI SELDVFGSKG SWPSNKSNKR SRQLFFGDEL 360 SALDALHTLA DISVNILQPS SIAESESSAQ FKDGSKDNES DDKPSVPAAV SLFDKKDKPR 420 KTKKIKRQSE IASNEVVTRK KARLSKDHHH DGSTSEVKQD DCKCGVKMEK KKRKSSTLKI 480 SKDEKNTLKD SEKTEASAEE GKVSSNKAMD AVDTTENAIT QQSDSASKSK SRRKLGILKA 540 LAPESKPAEG ADDSCDNVSY PVNNAIELKD KLSHCLSSRF LRRWCMSEWF YSAIDYPWFA 600 KSEFVEYLNH VKLGHVPRLT RVEWGVIRSS LGKPRRLSKQ FLQEEREKLS QYRESVRQHY 660 AELQSGVREG LPTDLARPLA VGQRVIACHP KTRELHDGSV LTVDRNRCRV QFDRPELGVE 720 FVMDIDCMPL HPLENFPESL RRQNIVNKYY SSFSEVKFED RSKEYGGGGA PRFIPNVSFH 780 SAGATVTP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 287 | 299 | KPKVKRSQKRRKK |
2 | 290 | 296 | VKRSQKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 9e-90 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG000790.4 |