PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG000790.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 1169aa MW: 129403 Da PI: 9.3037 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.6 | 1.2e-07 | 45 | 80 | 3 | 40 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W+++E e+++ a +++G++ W+++a + Rt ++ TRIDC5BG000790.3 45 QWSKDELERFYAAYRKYGKD-WRKVAGAVH-DRTSDMV 80 6*****************99.******999.9997665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1169 aa Download sequence |
MSSTRKVRNV NKRYAKINED WPEKDATVVQ KNKVRKKKLS DLGSQWSKDE LERFYAAYRK 60 YGKDWRKVAG AVHDRTSDMV EALYNMNRAY LSLPEGTATA AGLIAMMTDH YNILDGSNSD 120 HESNGSPKTS RKPQKRGRAK LQSVSKASDT RYPDLLQSQP ASSSYGCLSL LKKKRSGDLF 180 VGNKPRAVGK RTPRVPVASM YHRDDKAGPS NRQAKPDANN GDEEGALAAL ALAEVCQRGS 240 PQVSQTSGRS SGQLFLSPGK SIDRKNADSE MGSSKMHGFQ VDTDYPEGSL GSREAETADY 300 PKDASYFLNN EGSASGKSKP KVKRSQKRRK KAAHKTDDQF EDDREACSGT EEGCSSRKAK 360 DISELDVFGS KGSWPSNKSN KRSRQLFFGD ELSALDALHT LADISVNILQ PSSIAESESS 420 AQFKDGSKDN ESDDKPSVPA AVSLFDKKDK PRKTKKIKRQ SEIASNEVVT RKKARLSKDH 480 HHDGSTSEVK QDDCKCGVKM EKKKRKSSTL KISKDEKNTL KDSEKTEASA EEGKVSSNKG 540 RHAHVSPVSK QNKSKAQESS PAHADFGKEA MDAVDTTENA ITQQSDSASK SKSRRKLGIL 600 KALAPESKPA EGADDSCDNV SYPVNNAIEL KDKLSHCLSS RFLRRWCMSE WFYSAIDYPW 660 FAKSEFVEYL NHVKLGHVPR LTRVEWGVIR SSLGKPRRLS KQFLQEEREK LSQYRESVRQ 720 HYAELQSGVR EGLPTDLARP LAVGQRVIAC HPKTRELHDG SVLTVDRNRC RVQFDRPELG 780 VEFVMDIDCM PLHPLENFPE SLRRQNIVNK YYSSFSEVKF EDRSKEYGGG GAPRFIPNGD 840 AFDSTAQAKT TANEATVAAH QAMYGQPCTL SQIQEREADI RALAELSRAL DKKEALLVEL 900 RHMNEEVSGK QKDGEIIRDL EHFRKQYAMV LVQLRDSNDH VASALLCLRQ RNTFHGQPTQ 960 SYPNKSTENG GAFNRTPDPS SNLFGYINQE SGSQVMEIIE TSRSKAKTMV DVAVQAMCKV 1020 SEGENAFAKI GEALDNLNLR GTGSGSSILG IRRIPPDSGQ ANSDNCAAGR FDPAAAANNI 1080 SSPRVLPNGS DSDAQFPSEL ISSCVATILM IQNCTEKQYH PAEVAHILDS ALSRLQPCSS 1140 QNVPIFREIE MCMGIIKNQM LALIPTPSG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 319 | 331 | KPKVKRSQKRRKK |
2 | 322 | 328 | VKRSQKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21430.2 | 0.0 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG000790.3 |