PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG000640.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 395aa MW: 46819 Da PI: 8.3501

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG000640.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.1	1.9e-25	31	121	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 Yn+YA+ GFsvr + +++ k ++e++ r+f+Cskeg+r e+ + t+++r++ra tr+gCka+l+++ + +g+w v+k++ HnH+la TRIDC5BG000640.4 31 HYNRYARAKGFSVRLDDKEYVKGTREVKARRFCCSKEGHRLEKYFQaTDQKREPRALTRCGCKAMLEIQHDAgRGQWFVKKFVDVHNHPLA 121 6*************************************999877689999****************9**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MDGHTASLEE IEEYHMMVSQ MFASEKQGYE HYNRYARAKG FSVRLDDKEY VKGTREVKAR 60 RFCCSKEGHR LEKYFQATDQ KREPRALTRC GCKAMLEIQH DAGRGQWFVK KFVDVHNHPL 120 ADPDQSAFLW SHRRMNDAHK ADAVEYGLGG LRTFQIMNVA EKQHGGYPHV GYISRDLYNF 180 FARYKKKRIL GRDADFVLNH MRVQEERDAE FFFKYTTDDE GHLRNLFWAD SQSQIDYDAF 240 GDVVVFDSTY RVNRYNLPFV AFVGLNHHRS IVVFGIGVVS DETHKSYEWL LQTFVEATGH 300 KEPISVITDG DSAMRKAIRK ILPRTDHRLC SWHIEQNIIR HLHNPMLDDF RKLIYCRMGV 360 YQFEKSWAEF KANYEIEEEN EWMSRMYKLR KKWAT

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MDGHTASLEE IEEYHMMVSQ MFASEKQGYE HYNRYARAKG FSVRLDDKEY VKGTREVKAR  60
RFCCSKEGHR LEKYFQATDQ KREPRALTRC GCKAMLEIQH DAGRGQWFVK KFVDVHNHPL  120
ADPDQSAFLW SHRRMNDAHK ADAVEYGLGG LRTFQIMNVA EKQHGGYPHV GYISRDLYNF  180
FARYKKKRIL GRDADFVLNH MRVQEERDAE FFFKYTTDDE GHLRNLFWAD SQSQIDYDAF  240
GDVVVFDSTY RVNRYNLPFV AFVGLNHHRS IVVFGIGVVS DETHKSYEWL LQTFVEATGH  300
KEPISVITDG DSAMRKAIRK ILPRTDHRLC SWHIEQNIIR HLHNPMLDDF RKLIYCRMGV  360
YQFEKSWAEF KANYEIEEEN EWMSRMYKLR KKWAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-71	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG000640.4