PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5BG000070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 232aa MW: 26345.1 Da PI: 9.9938 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 82.1 | 3.6e-26 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ri+n nrqvtfskRr g++KKA EL +LCda+ a+iifsstg+ly ++s TRIDC5BG000070.1 9 ERIDNAANRQVTFSKRRGGLMKKARELAILCDADLALIIFSSTGRLYNFAS 59 69***********************************************86 PP | |||||||
2 | K-box | 70.8 | 4.1e-24 | 82 | 171 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + +++a+ +q+e++ L+++++nLq+++R+llGe+L+ ++++Lq L +q+e sl ++R++K++++ e+i+el +k +q+en +L kkl TRIDC5BG000070.1 82 NPTSEAKLWQREVTTLRQQVQNLQHNNRQLLGEELSGSTVRDLQFLVNQVEMSLHSVRKRKEQVIAEEIHELNQKGFLIQKENIELGKKL 171 67789999******************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MGRGKIAIER IDNAANRQVT FSKRRGGLMK KARELAILCD ADLALIIFSS TGRLYNFASS 60 SGMEAILERY QEAKQEHCGV LNPTSEAKLW QREVTTLRQQ VQNLQHNNRQ LLGEELSGST 120 VRDLQFLVNQ VEMSLHSVRK RKEQVIAEEI HELNQKGFLI QKENIELGKK LSIAHKRNIE 180 LQKKLSGVMR TSEQQASGSS SKAAAGLLLS TRAREPRIFI DLELRQQEHE DE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57230.1 | 6e-62 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5BG000070.1 |