PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG078610.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 87aa MW: 9540.7 Da PI: 8.0555

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG078610.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	47.5	4.7e-15	15	57	1	43
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergf 43 rW++qe+laL+++r+em+ ++r+++lk+plWe+vs+++ ++ TRIDC5AG078610.5 15 RWPRQETLALLKIRSEMDAAFREAALKGPLWEQVSRYVTQHST 57 8*************************************98865 PP

Sequence ? help Back to Top
Protein Sequence Length: 87 aa Download sequence
EGERGGSSSA AGGNRWPRQE TLALLKIRSE MDAAFREAAL KGPLWEQVSR YVTQHSTQPP 60 MPCQFSNLQA IDRSTSRSVM DGCLNCA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	9e-18	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG078610.5