PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG078610.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 613aa MW: 67335.3 Da PI: 10.1127

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG078610.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.9	3.2e-29	84	168	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r+em+ ++r+++lk+plWe+vs++++e g +rs+k+C+ek+en+ k+y+++k+g+ +r ++ +t+++f++lea TRIDC5AG078610.4 84 RWPRQETLALLKIRSEMDAAFREAALKGPLWEQVSRRLAEMGHTRSAKKCREKFENVDKYYRRTKDGRTGR--GDGKTYRFFTELEA 168 8******************************************************************97..77778****985 PP
2	trihelix	108	6.3e-34	439	524	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+eme+r+++++ k+plWe++s mr+ g++rs+k+Ckekwen+nk++kk+ke+++kr +e+s+tcpyf+ql+a TRIDC5AG078610.4 439 RWPKAEVHALIQLRTEMETRYQDTAPKGPLWEDISVGMRRLGYNRSSKRCKEKWENINKYFKKVKESSRKR-PEDSKTCPYFHQLDA 524 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
EGRAGAMQQP ADMPPFSPPA GAPSPISSRP PAPAPAPAQH HQQQQQHMDE QHGGAAVSGS 60 GSGSVDGGEE GERGGSSSAA GGNRWPRQET LALLKIRSEM DAAFREAALK GPLWEQVSRR 120 LAEMGHTRSA KKCREKFENV DKYYRRTKDG RTGRGDGKTY RFFTELEALH GAHHPPPAHV 180 PVAPPAAPAA STIAAYSAVP SAPRVLQAEP SPPPLLLTHQ PVPAEAAACR TTTTTPMGDA 240 SFSHDSDGED TDETADGGKR KRRGGSGSWG HGGKAMRFFE GLMRQVMERQ EAMQSRLLEA 300 IERRDQDRMI REEAWRRQEV ARLAREQDAL AQERAVAASR DAAVVSFIQR ITGQIVPVHA 360 PPSSFPAKPA ATVTSVKPPP LQPTQPQTPP PQPQPHATPT ATEPQPQTPQ PQHQQSKEIV 420 VHAPEQPPVD MAGGASPSRW PKAEVHALIQ LRTEMETRYQ DTAPKGPLWE DISVGMRRLG 480 YNRSSKRCKE KWENINKYFK KVKESSRKRP EDSKTCPYFH QLDALYRTKA LASSSGRAGH 540 RALAGAAVFP DAATCGAARR ARGQERDHQR QRPWERCGHA SEGQQWRWCC GDVPLPRPCR 600 RQRRQQRHGD EQS

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

EGRAGAMQQP ADMPPFSPPA GAPSPISSRP PAPAPAPAQH HQQQQQHMDE QHGGAAVSGS  60
GSGSVDGGEE GERGGSSSAA GGNRWPRQET LALLKIRSEM DAAFREAALK GPLWEQVSRR  120
LAEMGHTRSA KKCREKFENV DKYYRRTKDG RTGRGDGKTY RFFTELEALH GAHHPPPAHV  180
PVAPPAAPAA STIAAYSAVP SAPRVLQAEP SPPPLLLTHQ PVPAEAAACR TTTTTPMGDA  240
SFSHDSDGED TDETADGGKR KRRGGSGSWG HGGKAMRFFE GLMRQVMERQ EAMQSRLLEA  300
IERRDQDRMI REEAWRRQEV ARLAREQDAL AQERAVAASR DAAVVSFIQR ITGQIVPVHA  360
PPSSFPAKPA ATVTSVKPPP LQPTQPQTPP PQPQPHATPT ATEPQPQTPQ PQHQQSKEIV  420
VHAPEQPPVD MAGGASPSRW PKAEVHALIQ LRTEMETRYQ DTAPKGPLWE DISVGMRRLG  480
YNRSSKRCKE KWENINKYFK KVKESSRKRP EDSKTCPYFH QLDALYRTKA LASSSGRAGH  540
RALAGAAVFP DAATCGAARR ARGQERDHQR QRPWERCGHA SEGQQWRWCC GDVPLPRPCR  600
RQRRQQRHGD EQS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	4e-48	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG078610.4