PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG078610.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 629aa MW: 67535.7 Da PI: 10.2137

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG078610.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.8	3.3e-29	72	156	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r+em+ ++r+++lk+plWe+vs++++e g +rs+k+C+ek+en+ k+y+++k+g+ +r ++ +t+++f++lea TRIDC5AG078610.3 72 RWPRQETLALLKIRSEMDAAFREAALKGPLWEQVSRRLAEMGHTRSAKKCREKFENVDKYYRRTKDGRTGR--GDGKTYRFFTELEA 156 8******************************************************************97..77778****985 PP
2	trihelix	107.9	6.5e-34	438	523	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+eme+r+++++ k+plWe++s mr+ g++rs+k+Ckekwen+nk++kk+ke+++kr +e+s+tcpyf+ql+a TRIDC5AG078610.3 438 RWPKAEVHALIQLRTEMETRYQDTAPKGPLWEDISVGMRRLGYNRSSKRCKEKWENINKYFKKVKESSRKR-PEDSKTCPYFHQLDA 523 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MPPFSPPAGA PSPISSRPPA PAPAPAQHHQ QQQQHMDEQH GGAAVSGSGS GSVDGGEEGE 60 RGGSSSAAGG NRWPRQETLA LLKIRSEMDA AFREAALKGP LWEQVSRRLA EMGHTRSAKK 120 CREKFENVDK YYRRTKDGRT GRGDGKTYRF FTELEALHGA HHPPPAHVPV APPAAPAAST 180 IAAYSAVPSA PRVLQAEPSP PPLLLTHQPV PAEAAACRTT TTTPMGDASF SHDSDGEDTD 240 ETADGGKRKR RGGSGSWGHG GKAMRFFEGL MRQVMERQEA MQSRLLEAIE RRDQDRMIRE 300 EAWRRQEVAR LAREQDALAQ ERAVAASRDA AVVSFIQRIT GQTVTSVKPP PLQPTPVASA 360 APAPPTPRPP VQAQPNVTTP MRTQPQTPPP QPQPHATPTA TEPQPQTPQP QHQQSKEIVV 420 HAPEQPPVDM AGGASPSRWP KAEVHALIQL RTEMETRYQD TAPKGPLWED ISVGMRRLGY 480 NRSSKRCKEK WENINKYFKK VKESSRKRPE DSKTCPYFHQ LDALYRTKAL ASSSGVHAPA 540 LAPSPFPARA EAAPVTVLSP VPLSSQTPPP AAQRVEHGAK NVIINGNGHG NGAAMQVKAS 600 NGAGAAAMFP SPVHAAGNGG NNGTATNKV

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MPPFSPPAGA PSPISSRPPA PAPAPAQHHQ QQQQHMDEQH GGAAVSGSGS GSVDGGEEGE  60
RGGSSSAAGG NRWPRQETLA LLKIRSEMDA AFREAALKGP LWEQVSRRLA EMGHTRSAKK  120
CREKFENVDK YYRRTKDGRT GRGDGKTYRF FTELEALHGA HHPPPAHVPV APPAAPAAST  180
IAAYSAVPSA PRVLQAEPSP PPLLLTHQPV PAEAAACRTT TTTPMGDASF SHDSDGEDTD  240
ETADGGKRKR RGGSGSWGHG GKAMRFFEGL MRQVMERQEA MQSRLLEAIE RRDQDRMIRE  300
EAWRRQEVAR LAREQDALAQ ERAVAASRDA AVVSFIQRIT GQTVTSVKPP PLQPTPVASA  360
APAPPTPRPP VQAQPNVTTP MRTQPQTPPP QPQPHATPTA TEPQPQTPQP QHQQSKEIVV  420
HAPEQPPVDM AGGASPSRWP KAEVHALIQL RTEMETRYQD TAPKGPLWED ISVGMRRLGY  480
NRSSKRCKEK WENINKYFKK VKESSRKRPE DSKTCPYFHQ LDALYRTKAL ASSSGVHAPA  540
LAPSPFPARA EAAPVTVLSP VPLSSQTPPP AAQRVEHGAK NVIINGNGHG NGAAMQVKAS  600
NGAGAAAMFP SPVHAAGNGG NNGTATNKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	7e-49	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG078610.3