PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG078610.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 656aa MW: 70330.9 Da PI: 10.2597

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG078610.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.8	3.5e-29	78	162	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r+em+ ++r+++lk+plWe+vs++++e g +rs+k+C+ek+en+ k+y+++k+g+ +r ++ +t+++f++lea TRIDC5AG078610.2 78 RWPRQETLALLKIRSEMDAAFREAALKGPLWEQVSRRLAEMGHTRSAKKCREKFENVDKYYRRTKDGRTGR--GDGKTYRFFTELEA 162 8******************************************************************97..77778****985 PP
2	trihelix	107.9	6.9e-34	461	546	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+eme+r+++++ k+plWe++s mr+ g++rs+k+Ckekwen+nk++kk+ke+++kr +e+s+tcpyf+ql+a TRIDC5AG078610.2 461 RWPKAEVHALIQLRTEMETRYQDTAPKGPLWEDISVGMRRLGYNRSSKRCKEKWENINKYFKKVKESSRKR-PEDSKTCPYFHQLDA 546 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MQQPADMPPF SPPAGAPSPI SSRPPAPAPA PAQHHQQQQQ HMDEQHGGAA VSGSGSGSVD 60 GGEEGERGGS SSAAGGNRWP RQETLALLKI RSEMDAAFRE AALKGPLWEQ VSRRLAEMGH 120 TRSAKKCREK FENVDKYYRR TKDGRTGRGD GKTYRFFTEL EALHGAHHPP PAHVPVAPPA 180 APAASTIAAY SAVPSAPRVL QAEPSPPPLL LTHQPVPAEA AACRTTTTTP MGDASFSHDS 240 DGEDTDETAD GGKRKRRGGS GSWGHGGKAM RFFEGLMRQV MERQEAMQSR LLEAIERRDQ 300 DRMIREEAWR RQEVARLARE QDALAQERAV AASRDAAVVS FIQRITGQIV PVHAPPSSFP 360 AKPAATVTSV KPPPLQPTPV ASAAPAPPTP RPPVQAQPNV TTPMRTQPQT PPPQPQPHAT 420 PTATEPQPQT PQPQHQQSKE IVVHAPEQPP VDMAGGASPS RWPKAEVHAL IQLRTEMETR 480 YQDTAPKGPL WEDISVGMRR LGYNRSSKRC KEKWENINKY FKKVKESSRK RPEDSKTCPY 540 FHQLDALYRT KALASSSGVH APALAPSPFP ARAEAAPVTV LSPVPLSSQT PPPAAQRVEH 600 GAKNVIINGN GHGNGAAMQV KASNGAGAAA MFPSPVHAAG NGGNNGTATN KVVRNS

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MQQPADMPPF SPPAGAPSPI SSRPPAPAPA PAQHHQQQQQ HMDEQHGGAA VSGSGSGSVD  60
GGEEGERGGS SSAAGGNRWP RQETLALLKI RSEMDAAFRE AALKGPLWEQ VSRRLAEMGH  120
TRSAKKCREK FENVDKYYRR TKDGRTGRGD GKTYRFFTEL EALHGAHHPP PAHVPVAPPA  180
APAASTIAAY SAVPSAPRVL QAEPSPPPLL LTHQPVPAEA AACRTTTTTP MGDASFSHDS  240
DGEDTDETAD GGKRKRRGGS GSWGHGGKAM RFFEGLMRQV MERQEAMQSR LLEAIERRDQ  300
DRMIREEAWR RQEVARLARE QDALAQERAV AASRDAAVVS FIQRITGQIV PVHAPPSSFP  360
AKPAATVTSV KPPPLQPTPV ASAAPAPPTP RPPVQAQPNV TTPMRTQPQT PPPQPQPHAT  420
PTATEPQPQT PQPQHQQSKE IVVHAPEQPP VDMAGGASPS RWPKAEVHAL IQLRTEMETR  480
YQDTAPKGPL WEDISVGMRR LGYNRSSKRC KEKWENINKY FKKVKESSRK RPEDSKTCPY  540
FHQLDALYRT KALASSSGVH APALAPSPFP ARAEAAPVTV LSPVPLSSQT PPPAAQRVEH  600
GAKNVIINGN GHGNGAAMQV KASNGAGAAA MFPSPVHAAG NGGNNGTATN KVVRNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	8e-49	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG078610.2