PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG078610.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Trihelix

Protein Properties

Length: 692aa MW: 74890.4 Da PI: 8.0381

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG078610.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	62.9	7.2e-20	1	69	17	87
trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 m+ ++r+++lk+plWe+vs++++e g +rs+k+C+ek+en+ k+y+++k+g+ +r ++ +t+++f++lea TRIDC5AG078610.1 1 MDAAFREAALKGPLWEQVSRRLAEMGHTRSAKKCREKFENVDKYYRRTKDGRTGR--GDGKTYRFFTELEA 69 6889***********************************************97..77778****985 PP
2	trihelix	107.7	7.5e-34	368	453	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k ev+aLi++r+eme+r+++++ k+plWe++s mr+ g++rs+k+Ckekwen+nk++kk+ke+++kr +e+s+tcpyf+ql+a TRIDC5AG078610.1 368 RWPKAEVHALIQLRTEMETRYQDTAPKGPLWEDISVGMRRLGYNRSSKRCKEKWENINKYFKKVKESSRKR-PEDSKTCPYFHQLDA 453 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MDAAFREAAL KGPLWEQVSR RLAEMGHTRS AKKCREKFEN VDKYYRRTKD GRTGRGDGKT 60 YRFFTELEAL HGAHHPPPAH VPVAPPAAPA ASTIAAYSAV PSAPRVLQAE PSPPPLLLTH 120 QPVPAEAAAC RTTTTTPMGD ASFSHDSDGE DTDETADGGK RKRRGGSGSW GHGGKAMRFF 180 EGLMRQVMER QEAMQSRLLE AIERRDQDRM IREEAWRRQE VARLAREQDA LAQERAVAAS 240 RDAAVVSFIQ RITGQIVPVH APPSSFPAKP AATVTSVKPP PLQPTPVASA APAPPTPRPP 300 VQAQPNVTTP MRTQPQTPPP QPQPHATPTA TEPQPQTPQP QHQQSKEIVV HAPEQPPVDM 360 AGGASPSRWP KAEVHALIQL RTEMETRYQD TAPKGPLWED ISVGMRRLGY NRSSKRCKEK 420 WENINKYFKK VKESSRKRPE DSKTCPYFHQ LDALYRTKAL ASSSGVHAPA LAPSPFPARA 480 EAAPVTVLSP VPLSSQTPPP AAQRVEHGAK NVIINGNGHG NGAAMQVKAS NGAGAAAMFP 540 SPVHAAGNGG NNGTATNKVE SKPEGIAKET APVQPAVAMN HSYGRNDRRD VYDLDSDSMD 600 EDEEDDFDDD DEEEDQDGVP GGCNINMPPA QYDAQFLQRQ HQQQQQQNHN HGNNHNVVRP 660 NAVNGSGNPP AGNATPSSAP ATSGTPFLAM VQ

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MDAAFREAAL KGPLWEQVSR RLAEMGHTRS AKKCREKFEN VDKYYRRTKD GRTGRGDGKT  60
YRFFTELEAL HGAHHPPPAH VPVAPPAAPA ASTIAAYSAV PSAPRVLQAE PSPPPLLLTH  120
QPVPAEAAAC RTTTTTPMGD ASFSHDSDGE DTDETADGGK RKRRGGSGSW GHGGKAMRFF  180
EGLMRQVMER QEAMQSRLLE AIERRDQDRM IREEAWRRQE VARLAREQDA LAQERAVAAS  240
RDAAVVSFIQ RITGQIVPVH APPSSFPAKP AATVTSVKPP PLQPTPVASA APAPPTPRPP  300
VQAQPNVTTP MRTQPQTPPP QPQPHATPTA TEPQPQTPQP QHQQSKEIVV HAPEQPPVDM  360
AGGASPSRWP KAEVHALIQL RTEMETRYQD TAPKGPLWED ISVGMRRLGY NRSSKRCKEK  420
WENINKYFKK VKESSRKRPE DSKTCPYFHQ LDALYRTKAL ASSSGVHAPA LAPSPFPARA  480
EAAPVTVLSP VPLSSQTPPP AAQRVEHGAK NVIINGNGHG NGAAMQVKAS NGAGAAAMFP  540
SPVHAAGNGG NNGTATNKVE SKPEGIAKET APVQPAVAMN HSYGRNDRRD VYDLDSDSMD  600
EDEEDDFDDD DEEEDQDGVP GGCNINMPPA QYDAQFLQRQ HQQQQQQNHN HGNNHNVVRP  660
NAVNGSGNPP AGNATPSSAP ATSGTPFLAM VQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	1e-48	Trihelix family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG078610.1