PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG077620.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 624aa MW: 68483.2 Da PI: 6.5764 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 56.7 | 4e-18 | 27 | 84 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 k ++t+eq+e+Le++++ +++p+ ++r++L +++ +++ rq+kvWFqNrR ++k TRIDC5AG077620.2 27 KYVRYTPEQVETLERVYADCPKPTSSRRQQLLRECpilaNIEARQIKVWFQNRRCRDK 84 5678***************************************************998 PP | |||||||
2 | START | 155.1 | 5.6e-49 | 165 | 372 | 2 | 204 |
HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS START 2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 +aee+++e+++ka+ ++ Wv+++ +++g++++ +++ s++++g a+ra+g+v +++++ve+l d++ W +++++ e+ v+ + g+++ TRIDC5AG077620.2 165 IAEETLTEFLSKATGTAIEWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRP-SWFRDCRSLEVFTVLPGAngGTIE 256 789*******************************************************9999988888.***************98788**** PP EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS START 93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181 l +++l+a+++lvp Rdf+++Ry+ ++g++v++++S++ p+ +++vRae+lpSg+l++p+++g+s v++v+h + +++ ++++l TRIDC5AG077620.2 257 LVYTQLYAPTTLVPaRDFWTLRYTTIVEDGSLVVCERSLSGSGGGPSaasAQQFVRAEMLPSGYLVRPCDGGGSIVHIVDHLEFEAWNIPEVL 349 ****************************************9999999898899**************************************** PP HHHHHHHHHHHHHHHHHHTXXXX CS START 182 rslvksglaegaktwvatlqrqc 204 r+l++s+++ ++k+++a+l++ + TRIDC5AG077620.2 350 RPLYESSRVVAQKMTTAALRHIR 372 *******************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 624 aa Download sequence |
MAAAMAMRGG SSDGGGSDRG AGMDSGKYVR YTPEQVETLE RVYADCPKPT SSRRQQLLRE 60 CPILANIEAR QIKVWFQNRR CRDKLRKESS RLESVNRKVS AMNKLLMEEN ERLQKQVSQL 120 VHENAQVRQQ LQNTSMANDA SCESNVTAPQ NPIRDASNPS GLLSIAEETL TEFLSKATGT 180 AIEWVQMPGM KPGPDSVGIV AISHGCRGVA ARACGLVNLE PTKVVEILKD RPSWFRDCRS 240 LEVFTVLPGA NGGTIELVYT QLYAPTTLVP ARDFWTLRYT TIVEDGSLVV CERSLSGSGG 300 GPSAASAQQF VRAEMLPSGY LVRPCDGGGS IVHIVDHLEF EAWNIPEVLR PLYESSRVVA 360 QKMTTAALRH IRQIAQETSG EVVYALGRQP AVLRTFSQRL SRGFNDAISG FNDDGWSIMA 420 GDGIEDVVVA CNSTKKIRSI SNGVNAFEAP GGTICAKASM LLQSVPPAIL VRFLREHRSE 480 WADYSMDAYL ASALKTSTCS FPGLRPMRFS GSQIIMPLAH TVENEEILEV VRLEGQPLSH 540 DEVLLSRDID MLQLCTGIDE KSVGSSFQLV FAPIDDFPDD APLISSGFRV IPLDMKTVKH 600 FHPHYSPVLT FCRSPCALFA ICFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60690.1 | 0.0 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG077620.2 |