PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG077620.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 705aa    MW: 76732.2 Da    PI: 5.9304
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG077620.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.54.7e-182784356
                      --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
          Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                      k  ++t+eq+e+Le++++ +++p+ ++r++L +++    +++ rq+kvWFqNrR ++k
  TRIDC5AG077620.1 27 KYVRYTPEQVETLERVYADCPKPTSSRRQQLLRECpilaNIEARQIKVWFQNRRCRDK 84
                      5678***************************************************998 PP
2START154.87.1e-491653722204
                       HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEE CS
             START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galq 92 
                       +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++++ve+l d++  W +++++ e+  v+  +  g+++
  TRIDC5AG077620.1 165 IAEETLTEFLSKATGTAIEWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRP-SWFRDCRSLEVFTVLPGAngGTIE 256
                       789*******************************************************9999988888.***************98788**** PP

                       EEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHH CS
             START  93 lmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwll 181
                       l +++l+a+++lvp Rdf+++Ry+   ++g++v++++S++     p+    +++vRae+lpSg+l++p+++g+s v++v+h + +++ ++++l
  TRIDC5AG077620.1 257 LVYTQLYAPTTLVPaRDFWTLRYTTIVEDGSLVVCERSLSGSGGGPSaasAQQFVRAEMLPSGYLVRPCDGGGSIVHIVDHLEFEAWNIPEVL 349
                       ****************************************9999999898899**************************************** PP

                       HHHHHHHHHHHHHHHHHHTXXXX CS
             START 182 rslvksglaegaktwvatlqrqc 204
                       r+l++s+++ ++k+++a+l++ +
  TRIDC5AG077620.1 350 RPLYESSRVVAQKMTTAALRHIR 372
                       *******************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 705 aa     Download sequence    
MAAAMAMRGG SSDGGGSDRG AGMDSGKYVR YTPEQVETLE RVYADCPKPT SSRRQQLLRE  60
CPILANIEAR QIKVWFQNRR CRDKLRKESS RLESVNRKVS AMNKLLMEEN ERLQKQVSQL  120
VHENAQVRQQ LQNTSMANDA SCESNVTAPQ NPIRDASNPS GLLSIAEETL TEFLSKATGT  180
AIEWVQMPGM KPGPDSVGIV AISHGCRGVA ARACGLVNLE PTKVVEILKD RPSWFRDCRS  240
LEVFTVLPGA NGGTIELVYT QLYAPTTLVP ARDFWTLRYT TIVEDGSLVV CERSLSGSGG  300
GPSAASAQQF VRAEMLPSGY LVRPCDGGGS IVHIVDHLEF EAWNIPEVLR PLYESSRVVA  360
QKMTTAALRH IRQIAQETSG EVVYALGRQP AVLRTFSQRL SRGFNDAISG FNDDGWSIMA  420
GDGIEDVVVA CNSTKKIRSI SNGVNAFEAP GGTICAKASM LLQSVPPAIL VRFLREHRSE  480
WADYSMDAYL ASALKTSTCS FPGLRPMRFS GSQIIMPLAH TVENEEILEV VRLEGQPLSH  540
DEVLLSRDID MLQLCTGIDE KSVGSSFQLV FAPIDDFPDD APLISSGFRV IPLDMKTDVV  600
SSGRTLDLAS SLEVGSTAAQ ASGASSDDCN VRSVLTIAFQ FPYELHLQDS VAAMARQYVR  660
SIVSAVQRVS IAISPSQSGL NAGQRILSGL PEAATLARWI CQSYQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein