PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG073450.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 175aa MW: 19200.6 Da PI: 4.8679 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 126.2 | 1.5e-39 | 18 | 118 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 +CaaCk+lrr+Ca+dCvlapyfpa++p+++a vh++FGasnv +ll++lp +er +a++++++eA++r++dPvyG++g+i++lq++++ ++ e TRIDC5AG073450.2 18 RCAACKYLRRRCAHDCVLAPYFPASHPHRYASVHRVFGASNVARLLQSLPVDERAQAAETMAMEAQWRVEDPVYGCTGIISQLQEEIQATQCE 110 6******************************************************************************************** PP DUF260 94 lallkeel 101 la+++++l TRIDC5AG073450.2 111 LARTRAQL 118 **999875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
GDVEVEMHEE DQEGGGRRCA ACKYLRRRCA HDCVLAPYFP ASHPHRYASV HRVFGASNVA 60 RLLQSLPVDE RAQAAETMAM EAQWRVEDPV YGCTGIISQL QEEIQATQCE LARTRAQLAI 120 VPAHGAQLQG STVALPPPPQ PQRDDGHRVP ISQMQGLGEA VPLLDPDEFL DLDGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26660.1 | 8e-40 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG073450.2 |