PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG072110.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 150aa MW: 16741.3 Da PI: 6.9577 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 129.7 | 3.2e-40 | 5 | 150 | 97 | 239 |
GRAS 97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187 ++I++av+g +++Hi+ ++is G+QWp Ll+ La+R++gpp++RiTg++ p++g + +ee g+rL+++A+++gvpf+f++ +a++le TRIDC5AG072110.1 5 FSTNTIYKAVAGRRKLHIVHYGISTGFQWPDLLRLLANREGGPPEVRITGINTPQPGpcPAALMEEAGHRLNNYASQFGVPFKFRA-IASKLE 96 56789****************************************************999999***********************.7***** PP GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvv 239 d++ e+L+++p+E+l+V++ ++ +l+des++++ +rd vL+++ +++P v+ TRIDC5AG072110.1 97 DVRAEDLHIDPDEVLVVSSLYEFRTLMDESLTSDMlsPRDMVLNTISKMRPSVF 150 *****************************99887666**************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence |
VGLLFSTNTI YKAVAGRRKL HIVHYGISTG FQWPDLLRLL ANREGGPPEV RITGINTPQP 60 GPCPAALMEE AGHRLNNYAS QFGVPFKFRA IASKLEDVRA EDLHIDPDEV LVVSSLYEFR 120 TLMDESLTSD MLSPRDMVLN TISKMRPSVF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07530.1 | 2e-38 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG072110.1 |