PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG072100.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 541aa    MW: 60848.7 Da    PI: 7.8474
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG072100.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS312.59.3e-961605312373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cAeav s+d + a +lL+r++ ++sp+gd+ qRla+yft++L+arla+++s+ly++l  ++ts   + e + a++l   vs  +k++
  TRIDC5AG072100.1 160 ETLLTRCAEAVVSNDVRGAGKLLERIKCHSSPTGDARQRLAHYFTQGLEARLAGTGSRLYRSLMGKRTS---VLELIRAFHLHTAVSCSIKVG 249
                       689************************************************************999999...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                        l   ++I++av+g +++Hi+ ++++ G+QWp Ll+ La+R++gpp++RiTg++ p +g      ++e g+rL + A+++gvpf+f++ +a++
  TRIDC5AG072100.1 250 LLFSTNTIYKAVAGRRKLHIVHYGMTTGFQWPDLLRLLANREGGPPEVRITGINTPLPGpcPDALMQEAGHRLDNCASQFGVPFKFHA-IASK 341
                       ********************************************************9999899999**********************.79** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        ed++ e+L+++p+E+l+V++ ++  +l+des++ +   +rd vLk++++++P v++ +  +  ++++ F++rf +al+y++alfd +e+++p
  TRIDC5AG072100.1 342 PEDVRAEDLHIDPDEVLVVSSLYEFRTLMDESLTFDMvsPRDMVLKTIRKMRPSVFISSVVNGPYGAAFFMTRFRHALYYFTALFDVMETTVP 434
                       *******************************98765555****************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                        + ++r  vEr +l+r++ n++aceg++r+er +++++W++r ++aG++++pl+ +++   +  +++ + + +++ e++ +l++gWk+r L++
  TRIDC5AG072100.1 435 WDGDKRLLVERDILARSAINMIACEGTDRVERPQNYKEWQARNQRAGLRQLPLDPDIVLMLRDEVKNRYHKHFMISEDHRWLLQGWKGRVLYA 527
                       ********************************************************************9999********************* PP

              GRAS 370 vSaW 373
                        S W
  TRIDC5AG072100.1 528 HSTW 531
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MVSGCQVQDP VFFLNGTGTV EPNSMVFPSE SSTSMNMLSS MEFFKGMEEA NMFLPTDDVM  60
VDGRGRKKRS GMDGEAEAGL GRSSKQIVVL LHSTTTLEEE EATALEMLDR LILNGYEACP  120
SEMQEVVRVT WEDKENKAAR QSISRRGRRG ARHTVVTDLE TLLTRCAEAV VSNDVRGAGK  180
LLERIKCHSS PTGDARQRLA HYFTQGLEAR LAGTGSRLYR SLMGKRTSVL ELIRAFHLHT  240
AVSCSIKVGL LFSTNTIYKA VAGRRKLHIV HYGMTTGFQW PDLLRLLANR EGGPPEVRIT  300
GINTPLPGPC PDALMQEAGH RLDNCASQFG VPFKFHAIAS KPEDVRAEDL HIDPDEVLVV  360
SSLYEFRTLM DESLTFDMVS PRDMVLKTIR KMRPSVFISS VVNGPYGAAF FMTRFRHALY  420
YFTALFDVME TTVPWDGDKR LLVERDILAR SAINMIACEG TDRVERPQNY KEWQARNQRA  480
GLRQLPLDPD IVLMLRDEVK NRYHKHFMIS EDHRWLLQGW KGRVLYAHST WAAADATGSP  540
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-119GRAS family protein