PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG071690.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 213aa MW: 22744.5 Da PI: 6.5064 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.7 | 4.2e-08 | 184 | 206 | 7 | 29 |
HHHHHHHHHHHHHHHHHHCTSCC CS HLH 7 erErrRRdriNsafeeLrellPk 29 ++ErrRR+r+N++++ Lr+++Pk TRIDC5AG071690.3 184 MAERRRRKRLNDRLSMLRSIVPK 206 89********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MDQLDEQSFL DELMSLRREE ALPPAPAPWQ AYPGSGMMTT SDLLFYGGEG AEASSGTDMA 60 GPFLQQPMAP PPSAPPHRSH EEFNFDCLSE VCNPYRSCVG GVHGHGVVHA AGQALAQYPL 120 HDAMAEDDPS GSNLHRGGGA SSSSVPFVFG AGGARESPEI IRGVFPGAHA RSKLNGGTTS 180 KNLMAERRRR KRLNDRLSML RSIVPKITKV CDG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 186 | 193 | ERRRRKRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65640.2 | 2e-08 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG071690.3 |