PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG070490.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 193aa MW: 20998 Da PI: 10.7246

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG070490.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.9e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT Ede l+ ++k +G g+Wk ++ + g++R++k+c++rw++yl TRIDC5AG070490.3 14 RGAWTSKEDETLASYIKAHGEGRWKEVPLKAGLRRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	52.3	1.3e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+v+++++lG++ W++Ia +++ gRt++++k++w++ TRIDC5AG070490.3 67 RGNISDDEEELIVRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNST 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
RMRRACSAKE GVKRGAWTSK EDETLASYIK AHGEGRWKEV PLKAGLRRCG KSCRLRWLNY 60 LRPSIKRGNI SDDEEELIVR LHRLLGNRWS LIAGRLPGRT DNEIKNYWNS TLGRKALPER 120 AATRVVATPC ASASSGSSTG ASTAGLSSNC GAGTSAKAAG LLSSASVWVP KPVRCTGGLF 180 LSGDEHPHFV LYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	2e-56	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG070490.3