PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC5AG070490.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 215aa MW: 22625.6 Da PI: 10.5862 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.4 | 5.9e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT Ede l+ ++k +G g+Wk ++ + g++R++k+c++rw++yl TRIDC5AG070490.2 14 RGAWTSKEDETLASYIKAHGEGRWKEVPLKAGLRRCGKSCRLRWLNYL 61 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52 | 1.6e-16 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+v+++++lG++ W++Ia +++ gRt++++k++w++ TRIDC5AG070490.2 67 RGNISDDEEELIVRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNST 111 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
RMRRACSAKE GVKRGAWTSK EDETLASYIK AHGEGRWKEV PLKAGLRRCG KSCRLRWLNY 60 LRPSIKRGNI SDDEEELIVR LHRLLGNRWS LIAGRLPGRT DNEIKNYWNS TLGRKALPER 120 AATRVVATPC ASASSGSSTG ASTAGLSSNC GAGTSAKAAG LLSSASVWVP KPVRCTGGLF 180 LSGDAPLPAP VTQTRAVGGD GDECSGSSLA ASSGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 3e-56 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC5AG070490.2 |